Thermococcus sp. 5-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sp. 5-4 is a Gram-negative archaeon known for its unique adaptations to extreme environments. Notably, it possesses flagella, which facilitate motility in its habitat. This feature is significant for its ecological interactions, potentially allowing it to navigate toward optimal conditions for growth and survival. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and adaptation mechanisms in extreme environments. The genomic data for Thermococcus sp. 5-4 is cataloged under the accession NZ_CP021848.1, providing a resource for further genetic analysis and exploration of its biological functions. In terms of ecological insight, the presence of flagella in Thermococcus sp. 5-4 may enhance its ability to thrive in thermophilic environments, where competition for resources can be intense. The motility afforded by flagella could be advantageous for locating nutrients or escaping unfavorable conditions, thereby influencing its role in microbial community dynamics within geothermal systems. Understanding these traits helps to elucidate the survival strategies of extremophiles like Thermococcus sp. 5-4 and their contributions to their ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sp. 5-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus sp. 5-4 chromosome, complete genome.

Gene Summary

Adenine Count

408264 bp

Thymine Count

413725 bp

Guanine Count

516290 bp

Cytosine Count

516630 bp

Genome Length

1854909 bp

Protein-coding Genes

1977 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tellurite-resistance/dicarboxylate transporterCDI07_RS01700Not AvailableNegative295454 - 29645237069.5
nifb/nifx family molybdenum-iron cluster-binding proteinCDI07_RS01705Not AvailableNegative296497 - 29686813688.3
fmde family proteinCDI07_RS01710Not AvailablePositive297013 - 29770825968.4
iron abc transporter substrate-binding proteinCDI07_RS01715Not AvailablePositive297710 - 29883140956.2
feccd family abc transporter permeaseCDI07_RS01720Not AvailablePositive298837 - 29987136348.5
abc transporter atp-binding proteinCDI07_RS01725Not AvailablePositive299868 - 30065328910.5
tetratricopeptide repeat proteinCDI07_RS01730Not AvailableNegative300612 - 30157136858.0
pkd domain-containing proteinCDI07_RS01735Not AvailableNegative301642 - 304641108778.0
ribonuclease zCDI07_RS01740Not AvailablePositive304843 - 30578736351.8
trab domain-containing proteinCDI07_RS01745Not AvailablePositive305784 - 30648526475.0

Displaying genes 341 – 350 of 2029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.