Thermococcus sp. 5-4

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus sp. 5-4 is a Gram-negative archaeon known for its unique adaptations to extreme environments. Notably, it possesses flagella, which facilitate motility in its habitat. This feature is significant for its ecological interactions, potentially allowing it to navigate toward optimal conditions for growth and survival. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and adaptation mechanisms in extreme environments. The genomic data for Thermococcus sp. 5-4 is cataloged under the accession NZ_CP021848.1, providing a resource for further genetic analysis and exploration of its biological functions. In terms of ecological insight, the presence of flagella in Thermococcus sp. 5-4 may enhance its ability to thrive in thermophilic environments, where competition for resources can be intense. The motility afforded by flagella could be advantageous for locating nutrients or escaping unfavorable conditions, thereby influencing its role in microbial community dynamics within geothermal systems. Understanding these traits helps to elucidate the survival strategies of extremophiles like Thermococcus sp. 5-4 and their contributions to their ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus sp. 5-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus sp. 5-4 chromosome, complete genome.

Gene Summary

Adenine Count

408264 bp

Thymine Count

413725 bp

Guanine Count

516290 bp

Cytosine Count

516630 bp

Genome Length

1854909 bp

Protein-coding Genes

1977 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp phosphoribosyltransferaseCDI07_RS05025Not AvailablePositive899683 - 90032423565.8
histidinol dehydrogenaseCDI07_RS05030Not AvailablePositive900314 - 90144741954.9
imidazoleglycerol-phosphate dehydratase hisbCDI07_RS05035Not AvailablePositive901444 - 90198019584.6
imidazole glycerol phosphate synthase subunit hishCDI07_RS05040Not AvailablePositive901980 - 90257021537.1
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseCDI07_RS05045Not AvailablePositive902572 - 90327025478.6
imidazole glycerol phosphate synthase subunit hisfCDI07_RS05050Not AvailablePositive903252 - 90401027564.1
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieCDI07_RS05055Not AvailablePositive904020 - 90464324070.2
histidinol-phosphate transaminaseCDI07_RS05060Not AvailablePositive904640 - 90565638718.8
had family hydrolaseCDI07_RS05065Not AvailablePositive905647 - 90637828328.9
tigr01177 family methyltransferaseCDI07_RS05070Not AvailablePositive906403 - 90739837400.4

Displaying genes 1011 – 1020 of 2029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.