Opitutaceae bacterium

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Opitutia

Order

Opitutales

Family

Opitutaceae

Genus

Description

Opitutaceae bacterium is a member of the Opitutaceae family, characterized by its possession of two replicons. The genome of this bacterium is represented by two accessions: PAUB00000000.1 and NZNM00000000.1. These replicons indicate a potential complexity in its genetic organization, which may contribute to its adaptability and functionality in various environments. The Opitutaceae family is known for its diverse metabolic capabilities, often associated with the degradation of complex organic compounds. While specific metabolic pathways for Opitutaceae bacterium are not detailed, members of this family typically play roles in microbial communities, particularly in nutrient cycling and organic matter degradation. Understanding the genomic structure of Opitutaceae bacterium could provide insights into its ecological roles. The presence of multiple replicons suggests a capacity for genetic diversity and adaptability, which may be advantageous in fluctuating environmental conditions. This adaptability may enable Opitutaceae bacterium to thrive in specific ecological niches, potentially contributing to ecosystem functions such as soil health and biogeochemical cycling. The study of Opitutaceae bacterium, therefore, not only enhances our understanding of microbial diversity but also emphasizes the importance of such organisms in maintaining ecological balance and promoting the breakdown of organic materials in their habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Opitutaceae bacterium isolate EAC85 161621, whole genome

Gene Summary

Adenine Count

896326 bp

Thymine Count

899170 bp

Guanine Count

955286 bp

Cytosine Count

933707 bp

Genome Length

3684756 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucuronate isomeraseCMI16_00750Not AvailableNegative154960 - 15638453191.0
hypothetical proteinCMI16_00755Not AvailableNegative156381 - 15820466923.2
gluconate 5-dehydrogenaseCMI16_00760Not AvailableNegative158219 - 15900727805.3
hypothetical proteinCMI16_00765Not AvailablePositive159112 - 16040448029.6
Trna-argNot AvailableNot AvailablePositive160412 - 160488Not Available
30s ribosomal protein s18CMI16_00775Not AvailablePositive160599 - 1607937303.79
threonylcarbamoyl-amp synthaseCMI16_00780Not AvailablePositive160852 - 16184435541.1
is3 family transposaseCMI16_00785Not AvailableNegative161901 - 16284236239.0
hypothetical proteinCMI16_00790Not AvailableNegative162839 - 16310810449.0
hypothetical proteinCMI16_00795Not AvailableNegative163374 - 16390719683.5

Displaying genes 3371 – 3380 of 6375 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.