Pseudomonas sp. DrBHI1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. DrBHI1 is characterized by having a single replicon, which indicates its genomic structure is relatively straightforward compared to other bacteria that may possess multiple replicons. The complete genomic information for Pseudomonas sp. DrBHI1 is available under the accession number NIBE00000000.1, which serves as a reference for researchers interested in studying its genetic makeup and potential applications. Pseudomonas species are known for their metabolic versatility, which allows them to thrive in diverse environments, including soil, water, and as plant pathogens. The single replicon in DrBHI1 suggests a streamlined genomic organization that may contribute to its adaptability and survival in various ecological niches. This trait can also influence the organism's response to environmental changes and its interactions with other microbial communities. In a broader ecological context, the presence of Pseudomonas sp. DrBHI1 in different environments may play a role in biogeochemical cycles, particularly in nutrient cycling and degradation of organic materials. The metabolic capabilities of Pseudomonas species often enable them to degrade pollutants, suggesting that DrBHI1 could be investigated for bioremediation applications. Overall, the genomic simplicity, as denoted by a single replicon, combined with the ecological adaptability of Pseudomonas species, highlights its potential significance in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. DrBHI1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. DrBHI1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. DrBHI1 NODE_279_length_40067_cov_77.280632, whole

Gene Summary

Adenine Count

1006973 bp

Thymine Count

1010057 bp

Guanine Count

1819544 bp

Cytosine Count

1814895 bp

Genome Length

5657533 bp

Protein-coding Genes

4921 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bcr/cfla family drug resistance efflux transporterCC207_23190Not AvailablePositive4949537 - 495074841134.5
tetr family transcriptional regulatorCC207_23195Not AvailablePositive4950745 - 495135022049.2
homoprotocatechuate degradation operon regulator, hparCC207_23200Not AvailableNegative4951408 - 495183016392.1
4-hydroxyphenylacetate catabolism regulatory protein hpaaCC207_23205Not AvailableNegative4952002 - 495290434260.1
4-hydroxyphenylacetate isomeraseCC207_23210Not AvailablePositive4953045 - 495371923996.7
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCC207_23215Not AvailablePositive4953716 - 495449528985.2
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseCC207_23220Not AvailablePositive4954492 - 495595252817.3
3,4-dihydroxyphenylacetate 2,3-dioxygenaseCC207_23225Not AvailablePositive4956019 - 495694233687.9
5-carboxymethyl-2-hydroxymuconate isomeraseCC207_23230Not AvailablePositive4956952 - 495736214843.8
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseCC207_23235Not AvailablePositive4957370 - 495817329052.8

Displaying genes 4541 – 4550 of 5138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.