Nostoc commune NIES-4072

Gram-negativeFilamentous

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Nostoc

Description

Nostoc commune NIES-4072 is a Gram-negative, filamentous cyanobacterium. It is characterized by its filamentous shape, which is typical of many cyanobacteria, allowing it to form extensive mats in aquatic environments. The presence of flagella indicates that it has the capability for motility, which can aid in its dispersal and colonization of new habitats. This strain has a single replicon, which is a notable trait as it simplifies the genetic structure compared to organisms with multiple replicons. The genetic information for Nostoc commune NIES-4072 is cataloged under the accession number BDUD00000000.1, serving as a reference for further research and study. Ecologically, Nostoc commune is known to play a critical role in nitrogen fixation, contributing to the nutrient cycling in its environment. By converting atmospheric nitrogen into a usable form for plants, it supports ecosystems, particularly in nutrient-poor habitats. Its ability to form symbiotic relationships with various plant species further enhances its ecological importance, promoting biodiversity and the health of ecosystems in which it resides.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusNostoc
SpeciesNostoc commune
StrainNIES-4072

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nostoc commune NIES-4072
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostoc commune NIES-4072 DNA, scaffold: scaffold11, whole genome

Gene Summary

Adenine Count

2397853 bp

Thymine Count

2399278 bp

Guanine Count

1693848 bp

Cytosine Count

1688466 bp

Genome Length

8198700 bp

Protein-coding Genes

7426 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter-related proteinNIES4072_38810Not AvailableNegative4448253 - 444898726627.8
phosphonate abc transporter, periplasmic phosphonate-binding proteinNIES4072_38820Not AvailableNegative4449140 - 445011434866.1
putative endoribonuclease l-pspNIES4072_38830Not AvailableNegative4450267 - 445074617063.4
hypothetical proteinNIES4072_38840Not AvailablePositive4450931 - 445123911574.4
hypothetical proteinNIES4072_38850Not AvailablePositive4451242 - 445168516667.0
nudix hydrolaseNIES4072_38860Not AvailableNegative4451695 - 445212616379.5
4-alpha-glucanotransferaseNIES4072_38870Not AvailablePositive4452326 - 445383457309.7
hypothetical proteinNIES4072_38880Not AvailableNegative4453979 - 445479730057.2
pseudouridine synthaseNIES4072_38890Not AvailableNegative4454827 - 445558528610.0
hypothetical proteinNIES4072_38900Not AvailablePositive4455719 - 445643226315.1

Displaying genes 3881 – 3890 of 7494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0015254NorharmanC11H8N2Chemical structure of NorharmanNULL
Average168.1946Da
Monoisotopic168.068748266Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.