Nostoc commune NIES-4072

Gram-negativeFilamentous

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Nostoc

Description

Nostoc commune NIES-4072 is a Gram-negative, filamentous cyanobacterium. It is characterized by its filamentous shape, which is typical of many cyanobacteria, allowing it to form extensive mats in aquatic environments. The presence of flagella indicates that it has the capability for motility, which can aid in its dispersal and colonization of new habitats. This strain has a single replicon, which is a notable trait as it simplifies the genetic structure compared to organisms with multiple replicons. The genetic information for Nostoc commune NIES-4072 is cataloged under the accession number BDUD00000000.1, serving as a reference for further research and study. Ecologically, Nostoc commune is known to play a critical role in nitrogen fixation, contributing to the nutrient cycling in its environment. By converting atmospheric nitrogen into a usable form for plants, it supports ecosystems, particularly in nutrient-poor habitats. Its ability to form symbiotic relationships with various plant species further enhances its ecological importance, promoting biodiversity and the health of ecosystems in which it resides.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusNostoc
SpeciesNostoc commune
StrainNIES-4072

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nostoc commune NIES-4072
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostoc commune NIES-4072 DNA, scaffold: scaffold11, whole genome

Gene Summary

Adenine Count

2397853 bp

Thymine Count

2399278 bp

Guanine Count

1693848 bp

Cytosine Count

1688466 bp

Genome Length

8198700 bp

Protein-coding Genes

7426 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class i and iiNIES4072_33710Not AvailableNegative3814951 - 381612342626.6
transposaseNIES4072_33720Not AvailablePositive3816293 - 381656510620.8
hypothetical proteinNIES4072_33730Not AvailableNegative3816711 - 38169479154.78
hypothetical proteinNIES4072_33740Not AvailableNegative3817408 - 381775813477.9
gcn5-related n-acetyltransferaseNIES4072_33750Not AvailableNegative3818152 - 38183106055.19
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanyl ligaseNIES4072_33760Not AvailableNegative3818307 - 381966248533.7
hypothetical proteinNIES4072_33770Not AvailableNegative3819850 - 38200899009.78
hypothetical proteinNIES4072_33780Not AvailableNegative3820270 - 38203984639.86
tspo and mbr like proteinNIES4072_33790Not AvailablePositive3820531 - 382100417541.1
tspo and mbr like proteinNIES4072_33800Not AvailablePositive3821094 - 382156717462.1

Displaying genes 3371 – 3380 of 7494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0015254NorharmanC11H8N2Chemical structure of NorharmanNULL
Average168.1946Da
Monoisotopic168.068748266Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.