Nostoc commune NIES-4072

Gram-negativeFilamentous

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Nostoc

Description

Nostoc commune NIES-4072 is a Gram-negative, filamentous cyanobacterium. It is characterized by its filamentous shape, which is typical of many cyanobacteria, allowing it to form extensive mats in aquatic environments. The presence of flagella indicates that it has the capability for motility, which can aid in its dispersal and colonization of new habitats. This strain has a single replicon, which is a notable trait as it simplifies the genetic structure compared to organisms with multiple replicons. The genetic information for Nostoc commune NIES-4072 is cataloged under the accession number BDUD00000000.1, serving as a reference for further research and study. Ecologically, Nostoc commune is known to play a critical role in nitrogen fixation, contributing to the nutrient cycling in its environment. By converting atmospheric nitrogen into a usable form for plants, it supports ecosystems, particularly in nutrient-poor habitats. Its ability to form symbiotic relationships with various plant species further enhances its ecological importance, promoting biodiversity and the health of ecosystems in which it resides.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusNostoc
SpeciesNostoc commune
StrainNIES-4072

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nostoc commune NIES-4072
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostoc commune NIES-4072 DNA, scaffold: scaffold11, whole genome

Gene Summary

Adenine Count

2397853 bp

Thymine Count

2399278 bp

Guanine Count

1693848 bp

Cytosine Count

1688466 bp

Genome Length

8198700 bp

Protein-coding Genes

7426 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase tn3 family proteinNIES4072_24710Not AvailableNegative2811128 - 281187128586.8
site-specific recombinase xerd-like proteinNIES4072_24720Not AvailableNegative2811993 - 28122449164.02
xre family transcriptional regulatorNIES4072_24730Not AvailablePositive2812322 - 28125889743.81
hypothetical proteinNIES4072_24740Not AvailableNegative2813026 - 281379028265.4
aaa atpaseNIES4072_24750Not AvailableNegative2813818 - 281433319615.4
putative dna methylase containing a zn-ribbon moduleNIES4072_24760Not AvailablePositive2814346 - 28145377352.03
hypothetical proteinNIES4072_24770Not AvailablePositive2814602 - 28147876991.49
transposaseNIES4072_24780Not AvailableNegative2815692 - 281618318969.7
transposaseNIES4072_24790Not AvailableNegative2816403 - 281692119705.9
sulfataseNIES4072_24800Not AvailableNegative2816945 - 281860960873.1

Displaying genes 2471 – 2480 of 7494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0015254NorharmanC11H8N2Chemical structure of NorharmanNULL
Average168.1946Da
Monoisotopic168.068748266Da

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.