Calothrix sp. NIES-4101

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. NIES-4101 is characterized by having five replicons, which may reflect a complex genetic organization. This species is represented by multiple accessions, specifically AP018275.1, AP018276.1, AP018277.1, AP018278.1, and AP018279.1. These accessions indicate the presence of distinct genetic sequences that can provide insights into the organism's diversity and potential functional capabilities. The presence of multiple replicons in Calothrix sp. NIES-4101 suggests a potential adaptability to various environmental conditions. The genetic diversity indicated by the different accessions may allow for varied metabolic pathways or responses to changes in habitat, which is often a characteristic of cyanobacterial species. This trait is particularly relevant in understanding how Calothrix sp. NIES-4101 might interact with its ecosystem, potentially influencing nutrient cycling and primary productivity in aquatic environments. In summary, the five replicons and multiple accessions of Calothrix sp. NIES-4101 point to a genetically diverse organism that may have significant ecological roles, particularly in nutrient dynamics and adaptation to environmental stressors.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. NIES-4101
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. NIES-4101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. NIES-4101 plasmid plasmid6 DNA, complete genome.

Gene Summary

Adenine Count

1452 bp

Thymine Count

1893 bp

Guanine Count

1017 bp

Cytosine Count

877 bp

Genome Length

5239 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenase/reductase sdrNIES4101_27670Not AvailablePositive13423 - 1416026655.2
rna-directed dna polymeraseNIES4101_27680Not AvailablePositive14799 - 1601646943.1
hypothetical proteinNIES4101_27690Not AvailableNegative16109 - 1754553768.2
hypothetical proteinNIES4101_27700Not AvailableNegative18031 - 1844115456.7
hypothetical proteinNIES4101_27710Not AvailableNegative18447 - 187049427.22
hypothetical proteinNIES4101_27720Not AvailableNegative19174 - 1945511094.7
hypothetical proteinNIES4101_27730Not AvailableNegative19468 - 1975211185.8
hypothetical proteinNIES4101_27740Not AvailablePositive20372 - 205968135.03
hypothetical proteinNIES4101_27750Not AvailablePositive20600 - 2088711118.4
hypothetical proteinNIES4101_27760Not AvailableNegative21744 - 2209113495.6

Displaying genes 21 – 30 of 355 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.