Tolypothrix sp. NIES-4075

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Tolypothrichaceae

Genus

Tolypothrix

Description

Tolypothrix sp. NIES-4075 is a cyanobacterium characterized by a single replicon, as indicated by its genomic data. The organism is cataloged under the accession number BDUC00000000.1, which provides a reference for researchers seeking to access its genetic information. Cyanobacteria, including Tolypothrix species, are known for their ability to perform photosynthesis, contributing significantly to global carbon fixation and oxygen production. While specific ecological roles of Tolypothrix sp. NIES-4075 are not detailed in the provided information, cyanobacteria typically inhabit a variety of environments, including freshwater and terrestrial ecosystems, and can form symbiotic relationships with plants and fungi. The presence of a single replicon suggests a streamlined genomic architecture, which may facilitate efficient replication and adaptation to environmental changes. This trait can be indicative of the organism's evolutionary strategies in various habitats. Understanding the genomic characteristics of Tolypothrix sp. NIES-4075 can provide insights into its ecological interactions and potential applications in biotechnology, particularly in areas such as biofertilizers or bioremediation. In summary, the single replicon of Tolypothrix sp. NIES-4075, alongside its classification as a cyanobacterium, highlights its potential significance in ecological processes and its adaptability to diverse environments. Further research into its specific roles and applications could enhance our understanding of its contributions to ecosystems and its utility in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyTolypothrichaceae
GenusTolypothrix
SpeciesTolypothrix sp. NIES-4075
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tolypothrix sp. NIES-4075 DNA, scaffold: sequence66, whole genome

Gene Summary

Adenine Count

2386615 bp

Thymine Count

2406182 bp

Guanine Count

1724599 bp

Cytosine Count

1717652 bp

Genome Length

8254440 bp

Protein-coding Genes

7372 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1a family penicillin-binding proteinNIES4075_23370Not AvailableNegative2686535 - 268846970409.1
tyrosyl trna synthetaseNIES4075_23380Not AvailablePositive2688611 - 268983745637.6
orotidine 5'-phosphate decarboxylaseNIES4075_23390Not AvailablePositive2689857 - 269057925967.6
hypothetical proteinNIES4075_23400Not AvailablePositive2691082 - 269177425824.6
hypothetical proteinNIES4075_23410Not AvailablePositive2691719 - 26918655677.84
phage spo1 dna polymerase-like proteinNIES4075_23420Not AvailableNegative2691897 - 269257425212.5
phosphoribosyltransferaseNIES4075_23430Not AvailablePositive2692735 - 269343025166.8
hypothetical proteinNIES4075_23440Not AvailablePositive2693716 - 269409313997.8
hypothetical proteinNIES4075_23450Not AvailablePositive2694212 - 269465517003.7
short-chain dehydrogenase/reductase sdrNIES4075_23460Not AvailableNegative2694656 - 269493710186.6

Displaying genes 2341 – 2350 of 7445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.