Tolypothrix sp. NIES-4075

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Tolypothrichaceae

Genus

Tolypothrix

Description

Tolypothrix sp. NIES-4075 is a cyanobacterium characterized by a single replicon, as indicated by its genomic data. The organism is cataloged under the accession number BDUC00000000.1, which provides a reference for researchers seeking to access its genetic information. Cyanobacteria, including Tolypothrix species, are known for their ability to perform photosynthesis, contributing significantly to global carbon fixation and oxygen production. While specific ecological roles of Tolypothrix sp. NIES-4075 are not detailed in the provided information, cyanobacteria typically inhabit a variety of environments, including freshwater and terrestrial ecosystems, and can form symbiotic relationships with plants and fungi. The presence of a single replicon suggests a streamlined genomic architecture, which may facilitate efficient replication and adaptation to environmental changes. This trait can be indicative of the organism's evolutionary strategies in various habitats. Understanding the genomic characteristics of Tolypothrix sp. NIES-4075 can provide insights into its ecological interactions and potential applications in biotechnology, particularly in areas such as biofertilizers or bioremediation. In summary, the single replicon of Tolypothrix sp. NIES-4075, alongside its classification as a cyanobacterium, highlights its potential significance in ecological processes and its adaptability to diverse environments. Further research into its specific roles and applications could enhance our understanding of its contributions to ecosystems and its utility in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyTolypothrichaceae
GenusTolypothrix
SpeciesTolypothrix sp. NIES-4075
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tolypothrix sp. NIES-4075 DNA, scaffold: sequence66, whole genome

Gene Summary

Adenine Count

2386615 bp

Thymine Count

2406182 bp

Guanine Count

1724599 bp

Cytosine Count

1717652 bp

Genome Length

8254440 bp

Protein-coding Genes

7372 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidylate kinaseNIES4075_21770Not AvailableNegative2520182 - 252091927495.2
pas/pac sensor hybrid histidine kinaseNIES4075_21780Not AvailableNegative2520916 - 2523855109441.0
putative sensor proteinNIES4075_21790Not AvailablePositive2524286 - 2527618123535.0
pyridoxamine 5'-phosphate oxidase-related fmn-binding proteinNIES4075_21800Not AvailablePositive2528163 - 252866918760.1
cold-shock dna-binding domain proteinNIES4075_21810Not AvailableNegative2529053 - 252951717273.2
hypothetical proteinNIES4075_21820Not AvailableNegative2529905 - 253057024203.5
group 1 glycosyl transferaseNIES4075_21830Not AvailableNegative2530940 - 253202840810.1
binding-protein-dependent transport systems inner membrane componentNIES4075_21840Not AvailablePositive2532891 - 253363126417.9
globinNIES4075_21850Not AvailablePositive2534022 - 253457319866.0
formyltetrahydrofolate deformylaseNIES4075_21860Not AvailableNegative2534700 - 253555432355.1

Displaying genes 2181 – 2190 of 7445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.