Tolypothrix sp. NIES-4075

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Tolypothrichaceae

Genus

Tolypothrix

Description

Tolypothrix sp. NIES-4075 is a cyanobacterium characterized by a single replicon, as indicated by its genomic data. The organism is cataloged under the accession number BDUC00000000.1, which provides a reference for researchers seeking to access its genetic information. Cyanobacteria, including Tolypothrix species, are known for their ability to perform photosynthesis, contributing significantly to global carbon fixation and oxygen production. While specific ecological roles of Tolypothrix sp. NIES-4075 are not detailed in the provided information, cyanobacteria typically inhabit a variety of environments, including freshwater and terrestrial ecosystems, and can form symbiotic relationships with plants and fungi. The presence of a single replicon suggests a streamlined genomic architecture, which may facilitate efficient replication and adaptation to environmental changes. This trait can be indicative of the organism's evolutionary strategies in various habitats. Understanding the genomic characteristics of Tolypothrix sp. NIES-4075 can provide insights into its ecological interactions and potential applications in biotechnology, particularly in areas such as biofertilizers or bioremediation. In summary, the single replicon of Tolypothrix sp. NIES-4075, alongside its classification as a cyanobacterium, highlights its potential significance in ecological processes and its adaptability to diverse environments. Further research into its specific roles and applications could enhance our understanding of its contributions to ecosystems and its utility in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyTolypothrichaceae
GenusTolypothrix
SpeciesTolypothrix sp. NIES-4075
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tolypothrix sp. NIES-4075 DNA, scaffold: sequence66, whole genome

Gene Summary

Adenine Count

2386615 bp

Thymine Count

2406182 bp

Guanine Count

1724599 bp

Cytosine Count

1717652 bp

Genome Length

8254440 bp

Protein-coding Genes

7372 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNIES4075_12870Not AvailablePositive1446507 - 144688114004.8
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferaseNIES4075_12880Not AvailableNegative1447058 - 144826342186.2
hypothetical proteinNIES4075_12890Not AvailableNegative1448350 - 144908727799.5
crp/fnr family transcriptional regulatorNIES4075_12900Not AvailableNegative1449173 - 144985325172.7
hypothetical proteinNIES4075_12910Not AvailablePositive1450409 - 1454341144685.0
sugar transferaseNIES4075_12920Not AvailablePositive1454655 - 145532925336.8
putative transposaseNIES4075_12930Not AvailablePositive1455401 - 145585917391.1
putative transposase, orfbNIES4075_12940Not AvailablePositive1456119 - 145649014113.7
binding-protein-dependent transport systems inner membrane componentNIES4075_12950Not AvailableNegative1456604 - 145743430828.8
5-formyltetrahydrofolate cyclo-ligaseNIES4075_12960Not AvailableNegative1457765 - 145834621784.1

Displaying genes 1291 – 1300 of 7445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.