Pseudomonas sp. RU47

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RU47 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The organism is cataloged under the accession number NZ_CP022411.1, indicating its genomic sequence is available for further research and analysis. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse environments. This versatility is supported by their ability to degrade a wide range of organic compounds, making them valuable in bioremediation efforts. While specific metabolic pathways for RU47 are not detailed in the provided data, the traits associated with Pseudomonas suggest potential applications in environmental microbiology. Furthermore, the presence of a single replicon in Pseudomonas sp. RU47 may influence its adaptability to various ecological niches, as the simplicity of its genomic structure can facilitate rapid evolutionary changes in response to environmental pressures. This characteristic often allows Pseudomonas species to quickly develop resistance to antibiotics and other stressors, highlighting their ecological importance and potential challenges in clinical settings. In summary, Pseudomonas sp. RU47, with its single replicon and genomic accessibility, exemplifies the adaptability and metabolic potential characteristic of the Pseudomonas genus, emphasizing its ecological significance and relevance in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RU47
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RU47
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RU47 chromosome, complete genome.

Gene Summary

Adenine Count

1360708 bp

Thymine Count

1358885 bp

Guanine Count

1971204 bp

Cytosine Count

1972666 bp

Genome Length

6663463 bp

Protein-coding Genes

5769 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ncs2 family permeaseCCX46_RS26400Not AvailablePositive5781466 - 578276144830.3
trna (uridine(54)-c5)-methyltransferase trmaCCX46_RS26405Not AvailablePositive5782758 - 578383740651.4
type ii 3-dehydroquinate dehydrataseCCX46_RS26410Not AvailablePositive5784035 - 578447515810.9
shikimate dehydrogenaseCCX46_RS26415Not AvailablePositive5784481 - 578533530586.1
tetr family transcriptional regulatorCCX46_RS26425Not AvailableNegative5785440 - 578611725990.0
3-dehydroshikimate dehydratase quicCCX46_RS26430Not AvailableNegative5786219 - 578812070233.2
mfs transporterCCX46_RS26435Not AvailablePositive5788477 - 578981448970.9
dmt family transporterCCX46_RS26440Not AvailableNegative5789943 - 579082131795.1
sugar phosphate isomerase/epimerase family proteinCCX46_RS26445Not AvailableNegative5790935 - 579175030112.2
gfo/idh/moca family proteinCCX46_RS26450Not AvailableNegative5791753 - 579281438110.7

Displaying genes 5151 – 5160 of 5978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.