Pseudomonas sp. RU47

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RU47 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The organism is cataloged under the accession number NZ_CP022411.1, indicating its genomic sequence is available for further research and analysis. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse environments. This versatility is supported by their ability to degrade a wide range of organic compounds, making them valuable in bioremediation efforts. While specific metabolic pathways for RU47 are not detailed in the provided data, the traits associated with Pseudomonas suggest potential applications in environmental microbiology. Furthermore, the presence of a single replicon in Pseudomonas sp. RU47 may influence its adaptability to various ecological niches, as the simplicity of its genomic structure can facilitate rapid evolutionary changes in response to environmental pressures. This characteristic often allows Pseudomonas species to quickly develop resistance to antibiotics and other stressors, highlighting their ecological importance and potential challenges in clinical settings. In summary, Pseudomonas sp. RU47, with its single replicon and genomic accessibility, exemplifies the adaptability and metabolic potential characteristic of the Pseudomonas genus, emphasizing its ecological significance and relevance in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RU47
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RU47
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RU47 chromosome, complete genome.

Gene Summary

Adenine Count

1360708 bp

Thymine Count

1358885 bp

Guanine Count

1971204 bp

Cytosine Count

1972666 bp

Genome Length

6663463 bp

Protein-coding Genes

5769 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent transcriptional regulatorCCX46_RS26080Not AvailablePositive5717570 - 571891650098.3
glycine oxidase thioCCX46_RS26085Not AvailableNegative5719033 - 572013339350.2
type iv pilin proteinCCX46_RS26090Not AvailableNegative5720191 - 572059214708.7
pilus assembly proteinCCX46_RS26095Not AvailableNegative5720608 - 5723697108199.0
pilx n-terminal domain-containing pilus assembly proteinCCX46_RS26100Not AvailableNegative5723684 - 572416316535.8
pilw family proteinCCX46_RS26105Not AvailableNegative5724174 - 572488725260.5
type iv pilus modification protein pilvCCX46_RS26110Not AvailableNegative5724884 - 572533316002.0
gsph/fimt family pseudopilinCCX46_RS26115Not AvailableNegative5725330 - 572580316356.9
gsph/fimt family pseudopilinCCX46_RS26120Not AvailablePositive5725934 - 572648819982.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCCX46_RS26125Not AvailableNegative5726460 - 572740434337.8

Displaying genes 5091 – 5100 of 5978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.