Pseudomonas sp. RU47

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RU47 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The organism is cataloged under the accession number NZ_CP022411.1, indicating its genomic sequence is available for further research and analysis. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse environments. This versatility is supported by their ability to degrade a wide range of organic compounds, making them valuable in bioremediation efforts. While specific metabolic pathways for RU47 are not detailed in the provided data, the traits associated with Pseudomonas suggest potential applications in environmental microbiology. Furthermore, the presence of a single replicon in Pseudomonas sp. RU47 may influence its adaptability to various ecological niches, as the simplicity of its genomic structure can facilitate rapid evolutionary changes in response to environmental pressures. This characteristic often allows Pseudomonas species to quickly develop resistance to antibiotics and other stressors, highlighting their ecological importance and potential challenges in clinical settings. In summary, Pseudomonas sp. RU47, with its single replicon and genomic accessibility, exemplifies the adaptability and metabolic potential characteristic of the Pseudomonas genus, emphasizing its ecological significance and relevance in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RU47
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RU47
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RU47 chromosome, complete genome.

Gene Summary

Adenine Count

1360708 bp

Thymine Count

1358885 bp

Guanine Count

1971204 bp

Cytosine Count

1972666 bp

Genome Length

6663463 bp

Protein-coding Genes

5769 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCCX46_RS31030Not AvailablePositive5397671 - 53977964298.36
padr family transcriptional regulatorCCX46_RS24495Not AvailablePositive5397841 - 539841621203.2
siderophore-interacting proteinCCX46_RS24500Not AvailablePositive5398413 - 539920129156.1
pr6pr family membrane proteinCCX46_RS24505Not AvailableNegative5399304 - 539994223693.6
vf530 family dna-binding proteinCCX46_RS24510Not AvailableNegative5399944 - 54001748939.91
carbohydrate porinCCX46_RS24515Not AvailablePositive5400475 - 540183650202.1
glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenaseCCX46_RS24520Not AvailablePositive5402054 - 540446586266.6
metal abc transporter atp-binding proteinCCX46_RS30950Not AvailablePositive5404534 - 54046473835.49
duf6124 family proteinCCX46_RS24530Not AvailablePositive5405010 - 540538413888.4
hypothetical proteinCCX46_RS24540Not AvailablePositive5405627 - 540607916548.3

Displaying genes 4781 – 4790 of 5978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.