Pseudomonas sp. RU47

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RU47 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The organism is cataloged under the accession number NZ_CP022411.1, indicating its genomic sequence is available for further research and analysis. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse environments. This versatility is supported by their ability to degrade a wide range of organic compounds, making them valuable in bioremediation efforts. While specific metabolic pathways for RU47 are not detailed in the provided data, the traits associated with Pseudomonas suggest potential applications in environmental microbiology. Furthermore, the presence of a single replicon in Pseudomonas sp. RU47 may influence its adaptability to various ecological niches, as the simplicity of its genomic structure can facilitate rapid evolutionary changes in response to environmental pressures. This characteristic often allows Pseudomonas species to quickly develop resistance to antibiotics and other stressors, highlighting their ecological importance and potential challenges in clinical settings. In summary, Pseudomonas sp. RU47, with its single replicon and genomic accessibility, exemplifies the adaptability and metabolic potential characteristic of the Pseudomonas genus, emphasizing its ecological significance and relevance in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RU47
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RU47
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RU47 chromosome, complete genome.

Gene Summary

Adenine Count

1360708 bp

Thymine Count

1358885 bp

Guanine Count

1971204 bp

Cytosine Count

1972666 bp

Genome Length

6663463 bp

Protein-coding Genes

5769 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold shock domain-containing proteinCCX46_RS19115Not AvailablePositive4208021 - 42083029963.75
nadp-dependent isocitrate dehydrogenaseCCX46_RS19120Not AvailableNegative4208380 - 420963645345.7
nadp-dependent isocitrate dehydrogenaseCCX46_RS19130Not AvailablePositive4210118 - 421234379911.6
nudix hydrolaseCCX46_RS19135Not AvailablePositive4212542 - 421298816791.9
trna 2-thiouridine(34) synthase mnmaCCX46_RS19140Not AvailablePositive4213048 - 421417241539.3
high frequency lysogenization protein hfldCCX46_RS19145Not AvailablePositive4214169 - 421479223137.3
adenylosuccinate lyaseCCX46_RS19150Not AvailablePositive4214920 - 421629050743.8
cupin domain-containing proteinCCX46_RS19155Not AvailablePositive4216377 - 421754644104.1
gnat family n-acetyltransferaseCCX46_RS19160Not AvailablePositive4217539 - 421796415861.0
secretin n-terminal domain-containing proteinCCX46_RS19165Not AvailablePositive4218198 - 421895927570.5

Displaying genes 3731 – 3740 of 5978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.