Pseudomonas sp. RU47

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RU47 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The organism is cataloged under the accession number NZ_CP022411.1, indicating its genomic sequence is available for further research and analysis. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse environments. This versatility is supported by their ability to degrade a wide range of organic compounds, making them valuable in bioremediation efforts. While specific metabolic pathways for RU47 are not detailed in the provided data, the traits associated with Pseudomonas suggest potential applications in environmental microbiology. Furthermore, the presence of a single replicon in Pseudomonas sp. RU47 may influence its adaptability to various ecological niches, as the simplicity of its genomic structure can facilitate rapid evolutionary changes in response to environmental pressures. This characteristic often allows Pseudomonas species to quickly develop resistance to antibiotics and other stressors, highlighting their ecological importance and potential challenges in clinical settings. In summary, Pseudomonas sp. RU47, with its single replicon and genomic accessibility, exemplifies the adaptability and metabolic potential characteristic of the Pseudomonas genus, emphasizing its ecological significance and relevance in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RU47
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RU47
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RU47 chromosome, complete genome.

Gene Summary

Adenine Count

1360708 bp

Thymine Count

1358885 bp

Guanine Count

1971204 bp

Cytosine Count

1972666 bp

Genome Length

6663463 bp

Protein-coding Genes

5769 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoamide acetyltransferase family proteinCCX46_RS18605Not AvailablePositive4112344 - 411361244999.6
dihydrolipoyl dehydrogenaseCCX46_RS18610Not AvailablePositive4113620 - 411499348144.2
branched-chain amino acid aminotransferaseCCX46_RS18615Not AvailablePositive4115208 - 411622737049.2
tigr03915 family putative dna repair proteinCCX46_RS18620Not AvailableNegative4116477 - 411731031885.8
putative dna modification/repair radical sam proteinCCX46_RS18625Not AvailableNegative4117307 - 411852745436.6
arsr/smtb family transcription factorCCX46_RS18630Not AvailableNegative4118684 - 411943627157.8
cytochrome p450CCX46_RS18635Not AvailablePositive4119516 - 412061939342.4
nramp family divalent metal transporterCCX46_RS18640Not AvailableNegative4120749 - 412206847156.8
chalcone isomerase family proteinCCX46_RS18645Not AvailableNegative4122212 - 412274819949.9
hypothetical proteinCCX46_RS18650Not AvailablePositive4122895 - 412366826659.7

Displaying genes 3631 – 3640 of 5978 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.