Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. RU47 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1360708 bp
Thymine Count
1358885 bp
Guanine Count
1971204 bp
Cytosine Count
1972666 bp
Genome Length
6663463 bp
Protein-coding Genes
5769 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | CCX46_RS11555 | Not Available | Negative | 2527265 - 2527762 | 17432.6 |
| type vi secretion system contractile sheath large subunit | CCX46_RS11560 | Not Available | Negative | 2527865 - 2529346 | 55003.1 |
| type vi secretion system contractile sheath small subunit | CCX46_RS11565 | Not Available | Negative | 2529377 - 2529919 | 20126.9 |
| type vi secretion protein | CCX46_RS11570 | Not Available | Positive | 2530147 - 2530593 | 16466.8 |
| type vi secretion system baseplate subunit tssk | CCX46_RS11575 | Not Available | Positive | 2530640 - 2531971 | 48076.2 |
| dotu/tssl family secretion system protein | CCX46_RS11580 | Not Available | Positive | 2531990 - 2532754 | 28371.4 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | CCX46_RS11585 | Not Available | Positive | 2532751 - 2536575 | 143193.0 |
| type vi secretion system protein tssa | CCX46_RS11590 | Not Available | Positive | 2536572 - 2537654 | 40776.9 |
| 2-hydroxyacid dehydrogenase | CCX46_RS11595 | Not Available | Negative | 2537651 - 2538619 | 33870.4 |
| hypothetical protein | CCX46_RS11600 | Not Available | Negative | 2538791 - 2539219 | 15449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




