Porphyrobacter sp. CACIAM 03H1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. CACIAM 03H1 is characterized by a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP021378.1, which provides a unique identifier for researchers seeking to access its genomic information. The genus Porphyrobacter is known for its capacity to thrive in various environments, particularly in aquatic settings. While specific metabolic pathways and ecological roles of Porphyrobacter sp. CACIAM 03H1 are not detailed in the provided information, members of this genus are typically associated with the degradation of organic materials and may contribute to nutrient cycling in their habitats. The presence of a single replicon suggests a potential for efficient replication and maintenance of essential genetic functions, which may confer advantages in fluctuating environmental conditions. Understanding the genomic structure and capabilities of Porphyrobacter sp. CACIAM 03H1 could provide insights into its ecological roles, especially in nutrient-rich environments where microbial degradation processes are crucial for maintaining ecosystem health. In summary, Porphyrobacter sp. CACIAM 03H1, with its single replicon and specific genomic reference, represents an organism of interest in microbiological studies, particularly for its potential contributions to environmental processes and its adaptability in diverse habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. CACIAM 03H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. CACIAM 03H1 chromosome.

Gene Summary

Adenine Count

572618 bp

Thymine Count

570363 bp

Guanine Count

1187679 bp

Cytosine Count

1193363 bp

Genome Length

3525223 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 4 proteinCBR61_RS01840Not AvailableNegative380390 - 38148138875.8
udp-2,3-diacylglucosamine diphosphataseCBR61_RS01845Not AvailableNegative381487 - 38239534510.1
glutathione s-transferase family proteinCBR61_RS01850Not AvailableNegative382601 - 38322723137.8
helix-turn-helix domain-containing proteinCBR61_RS01855Not AvailablePositive383326 - 38430635177.3
nad(p)h-quinone oxidoreductaseCBR61_RS01860Not AvailableNegative384297 - 38532535923.5
duf1192 family proteinCBR61_RS01865Not AvailablePositive385424 - 3856277134.35
atp-dependent clp protease atp-binding subunit clpaCBR61_RS01870Not AvailablePositive385760 - 38811786159.3
ligase-associated dna damage response exonucleaseCBR61_RS01875Not AvailablePositive388185 - 38919236486.6
hypothetical proteinCBR61_RS01880Not AvailableNegative389215 - 38953210761.2
cisplatin damage response atp-dependent dna ligaseCBR61_RS01885Not AvailablePositive389631 - 39122959289.9

Displaying genes 381 – 390 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.