Porphyrobacter sp. CACIAM 03H1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. CACIAM 03H1 is characterized by a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP021378.1, which provides a unique identifier for researchers seeking to access its genomic information. The genus Porphyrobacter is known for its capacity to thrive in various environments, particularly in aquatic settings. While specific metabolic pathways and ecological roles of Porphyrobacter sp. CACIAM 03H1 are not detailed in the provided information, members of this genus are typically associated with the degradation of organic materials and may contribute to nutrient cycling in their habitats. The presence of a single replicon suggests a potential for efficient replication and maintenance of essential genetic functions, which may confer advantages in fluctuating environmental conditions. Understanding the genomic structure and capabilities of Porphyrobacter sp. CACIAM 03H1 could provide insights into its ecological roles, especially in nutrient-rich environments where microbial degradation processes are crucial for maintaining ecosystem health. In summary, Porphyrobacter sp. CACIAM 03H1, with its single replicon and specific genomic reference, represents an organism of interest in microbiological studies, particularly for its potential contributions to environmental processes and its adaptability in diverse habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. CACIAM 03H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. CACIAM 03H1 chromosome.

Gene Summary

Adenine Count

572618 bp

Thymine Count

570363 bp

Guanine Count

1187679 bp

Cytosine Count

1193363 bp

Genome Length

3525223 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative urea abc transporter substrate-binding proteinCBR61_RS13890Not AvailableNegative2905178 - 290626637813.3
duf6923 family proteinCBR61_RS13895Not AvailablePositive2906444 - 290741232837.9
tonb-dependent receptorCBR61_RS13900Not AvailableNegative2907510 - 291004190375.4
gntr family transcriptional regulatorCBR61_RS13905Not AvailablePositive2910449 - 291112024869.5
hydroxymethylglutaryl-coa lyaseCBR61_RS13910Not AvailablePositive2911252 - 291216031834.1
hydantoinase/oxoprolinase family proteinCBR61_RS13915Not AvailablePositive2912180 - 291423772550.2
hydantoinase b/oxoprolinase family proteinCBR61_RS13920Not AvailablePositive2914242 - 291613168808.9
caib/baif coa transferase family proteinCBR61_RS13925Not AvailablePositive2916128 - 291730942318.9
isochorismatase family proteinCBR61_RS13930Not AvailablePositive2917309 - 291794421870.0
abc transporter permeaseCBR61_RS13935Not AvailableNegative2917955 - 291915142333.4

Displaying genes 2821 – 2830 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.