Porphyrobacter sp. CACIAM 03H1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. CACIAM 03H1 is characterized by a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP021378.1, which provides a unique identifier for researchers seeking to access its genomic information. The genus Porphyrobacter is known for its capacity to thrive in various environments, particularly in aquatic settings. While specific metabolic pathways and ecological roles of Porphyrobacter sp. CACIAM 03H1 are not detailed in the provided information, members of this genus are typically associated with the degradation of organic materials and may contribute to nutrient cycling in their habitats. The presence of a single replicon suggests a potential for efficient replication and maintenance of essential genetic functions, which may confer advantages in fluctuating environmental conditions. Understanding the genomic structure and capabilities of Porphyrobacter sp. CACIAM 03H1 could provide insights into its ecological roles, especially in nutrient-rich environments where microbial degradation processes are crucial for maintaining ecosystem health. In summary, Porphyrobacter sp. CACIAM 03H1, with its single replicon and specific genomic reference, represents an organism of interest in microbiological studies, particularly for its potential contributions to environmental processes and its adaptability in diverse habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. CACIAM 03H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. CACIAM 03H1 chromosome.

Gene Summary

Adenine Count

572618 bp

Thymine Count

570363 bp

Guanine Count

1187679 bp

Cytosine Count

1193363 bp

Genome Length

3525223 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
paai family thioesteraseCBR61_RS11485Not AvailableNegative2406333 - 240671612848.7
tetr/acrr family transcriptional regulatorCBR61_RS11490Not AvailableNegative2406713 - 240728220315.6
yiid c-terminal domain-containing proteinCBR61_RS11495Not AvailableNegative2407292 - 240775015670.7
c13 family peptidaseCBR61_RS11500Not AvailableNegative2407839 - 240884635019.7
succinate dehydrogenase flavoprotein subunitCBR61_RS11505Not AvailableNegative2408973 - 241084167529.8
succinate dehydrogenase, hydrophobic membrane anchor proteinCBR61_RS11510Not AvailableNegative2410841 - 241122713470.6
succinate dehydrogenase, cytochrome b556 subunitCBR61_RS11515Not AvailableNegative2411241 - 241162113737.1
sdr family nad(p)-dependent oxidoreductaseCBR61_RS11520Not AvailablePositive2411731 - 241245625121.8
50s ribosomal protein l11 methyltransferaseCBR61_RS11525Not AvailablePositive2412446 - 241336032463.2
rna polymerase sigma factorCBR61_RS11530Not AvailableNegative2413461 - 241470844458.3

Displaying genes 2331 – 2340 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.