Porphyrobacter sp. CACIAM 03H1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Porphyrobacter

Description

Porphyrobacter sp. CACIAM 03H1 is characterized by a single replicon, indicating a streamlined genomic organization. The strain is cataloged under the accession NZ_CP021378.1, which provides a unique identifier for researchers seeking to access its genomic information. The genus Porphyrobacter is known for its capacity to thrive in various environments, particularly in aquatic settings. While specific metabolic pathways and ecological roles of Porphyrobacter sp. CACIAM 03H1 are not detailed in the provided information, members of this genus are typically associated with the degradation of organic materials and may contribute to nutrient cycling in their habitats. The presence of a single replicon suggests a potential for efficient replication and maintenance of essential genetic functions, which may confer advantages in fluctuating environmental conditions. Understanding the genomic structure and capabilities of Porphyrobacter sp. CACIAM 03H1 could provide insights into its ecological roles, especially in nutrient-rich environments where microbial degradation processes are crucial for maintaining ecosystem health. In summary, Porphyrobacter sp. CACIAM 03H1, with its single replicon and specific genomic reference, represents an organism of interest in microbiological studies, particularly for its potential contributions to environmental processes and its adaptability in diverse habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusPorphyrobacter
SpeciesPorphyrobacter sp. CACIAM 03H1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyrobacter sp. CACIAM 03H1 chromosome.

Gene Summary

Adenine Count

572618 bp

Thymine Count

570363 bp

Guanine Count

1187679 bp

Cytosine Count

1193363 bp

Genome Length

3525223 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf736 domain-containing proteinCBR61_RS09270Not AvailablePositive1937864 - 193819912251.0
lytic transglycosylase domain-containing proteinCBR61_RS09275Not AvailablePositive1938387 - 193911525114.6
relaxase/mobilization nuclease domain-containing proteinCBR61_RS09280Not AvailablePositive1939353 - 194111064268.7
conjugal transfer protein tragCBR61_RS09285Not AvailablePositive1941130 - 194310372145.5
copg family transcriptional regulatorCBR61_RS09290Not AvailablePositive1943112 - 194354016100.1
p-type conjugative transfer atpase trbbCBR61_RS09295Not AvailablePositive1943714 - 194470034557.9
trbc/virb2 family proteinCBR61_RS09300Not AvailablePositive1944733 - 194502910006.4
virb3 family type iv secretion system proteinCBR61_RS09305Not AvailablePositive1945029 - 19453019790.11
conjugal transfer protein trbeCBR61_RS09310Not AvailablePositive1945298 - 194773388982.8
p-type conjugative transfer protein trbjCBR61_RS09315Not AvailablePositive1947730 - 194844625431.3

Displaying genes 1881 – 1890 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.