Hyphomonadaceae bacterium TMED5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Description

Hyphomonadaceae bacterium TMED5 is a notable member of the Hyphomonadaceae family, characterized by its single replicon structure. This trait suggests a streamlined genomic organization, which may influence its replication and metabolic processes. The bacterium's genome is cataloged under the accession number NHBK00000000.1, providing a reference point for researchers interested in its genetic makeup. As a representative of the Hyphomonadaceae family, TMED5 likely exhibits specific physiological and ecological traits associated with this group. Hyphomonadaceae bacteria are typically known for their unique adaptations to aquatic environments, often found in marine habitats. This ecological niche suggests that TMED5 may play a role in nutrient cycling or other ecological processes within its habitat. Understanding the genomic characteristics of Hyphomonadaceae bacterium TMED5 can provide insights into its potential functions in the environment. The single replicon may facilitate efficient adaptation to its surroundings, allowing it to thrive in specific ecological conditions. As research continues, the exploration of TMED5's metabolic pathways and ecological interactions may reveal its significance in microbial communities and its contributions to ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Hyphomonadaceae bacterium TMED5 66693, whole genome shotgun

Gene Summary

Adenine Count

800211 bp

Thymine Count

806095 bp

Guanine Count

981472 bp

Cytosine Count

963157 bp

Genome Length

3551039 bp

Protein-coding Genes

3299 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secdCBB65_16880Not AvailablePositive3510875 - 351248256894.2
protein translocase subunit secfCBB65_16885Not AvailablePositive3512493 - 351353037424.8
superoxide dismutaseCBB65_16890Not AvailableNegative3513599 - 351420122073.7
hypothetical proteinCBB65_16895Not AvailablePositive3514272 - 351496426110.9
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoCBB65_16900Not AvailableNegative3514946 - 351634651045.2
hypothetical proteinCBB65_16905Not AvailableNegative3516377 - 351721631606.6
hypothetical proteinCBB65_16910Not AvailablePositive3517336 - 351820531023.7
excinuclease abc subunit aCBB65_16915Not AvailableNegative3518215 - 3521130107565.0
single-stranded dna-binding proteinCBB65_16920Not AvailablePositive3521331 - 352181317612.6
hypothetical proteinCBB65_16925Not AvailablePositive3521961 - 352293236823.5

Displaying genes 3341 – 3350 of 3376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.