Candidatus Puniceispirillum sp. TMED52

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Puniceispirillales

Family

Candidatus Puniceispirillaceae

Genus

Candidatus Puniceispirillum

Description

Candidatus Puniceispirillum sp. TMED52 is a Gram-negative bacterium characterized by having a single replicon. This organism is notable for its unique taxonomic classification, which places it within the diverse group of bacteria known as the Planctomycetes. The strain is cataloged under the accession number NHDF00000000.1, indicating its genomic sequence has been deposited in a public database for further study and reference. As a Gram-negative bacterium, Candidatus Puniceispirillum sp. TMED52 possesses a double membrane structure comprising an outer membrane and an inner cytoplasmic membrane. This structural feature is significant, as it often influences the organism's interactions with its environment, including its susceptibility to antibiotics and the mechanisms it employs for nutrient uptake. The ecological role of Candidatus Puniceispirillum sp. TMED52 is likely tied to its habitat and metabolic capabilities, although specific details regarding its ecological niche are not provided. The understanding of its single replicon may suggest a streamlined genetic organization, which can confer advantages in specific environments, particularly those where efficient replication and resource utilization are vital for survival. Overall, Candidatus Puniceispirillum sp. TMED52 exemplifies the diversity of microbial life and underscores the importance of genomic studies in uncovering the ecological functions of lesser-known bacterial species. The insights gained from such organisms can enhance our understanding of microbial ecosystems and their dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCandidatus Puniceispirillales
FamilyCandidatus Puniceispirillaceae
GenusCandidatus Puniceispirillum
SpeciesCandidatus Puniceispirillum sp. TMED52
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Puniceispirillum sp. TMED52 152146, whole genome

Gene Summary

Adenine Count

759367 bp

Thymine Count

759195 bp

Guanine Count

698477 bp

Cytosine Count

704424 bp

Genome Length

2926997 bp

Protein-coding Genes

2809 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yiha family ribosome biogenesis gtp-binding proteinCBC12_09085Not AvailablePositive1832541 - 183318223238.0
acetylglutamate kinaseCBC12_09090Not AvailablePositive1833262 - 183416431275.1
pyrimidine 5'-nucleotidaseCBC12_09095Not AvailablePositive1834241 - 183493026403.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseCBC12_09100Not AvailablePositive1834977 - 183586431562.9
succinyl-diaminopimelate desuccinylaseCBC12_09105Not AvailablePositive1835871 - 183702841230.1
hypothetical proteinCBC12_09110Not AvailablePositive1837032 - 183760421101.6
trna pseudouridine(38-40) synthase truaCBC12_09115Not AvailableNegative1837672 - 183841527485.4
methionyl-trna formyltransferaseCBC12_09120Not AvailableNegative1838420 - 183943636032.5
peptide deformylaseCBC12_09125Not AvailableNegative1839429 - 183995019465.7
hypothetical proteinCBC12_09130Not AvailablePositive1840093 - 184116939816.8

Displaying genes 1811 – 1820 of 2871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.