Escherichia sp. ESNIH1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia sp. ESNIH1 is a Gram-negative bacterium notable for its presence of flagella, which facilitates motility. This organism is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its adaptability and replication efficiency in various environments. The genomic data for Escherichia sp. ESNIH1 can be accessed through the accession number PQKR00000000.1. The presence of flagella suggests that Escherichia sp. ESNIH1 can navigate its environment effectively, which is a significant trait for survival and competition in microbial communities. Flagella not only allow for movement toward favorable conditions but also away from harmful stimuli, a behavior known as chemotaxis. This motility can play a crucial role in the ecological niche that Escherichia sp. ESNIH1 occupies, potentially influencing its interactions with other microorganisms and its ability to colonize specific habitats. Understanding the traits of Escherichia sp. ESNIH1, particularly its Gram-negative structure and motility mechanisms, can provide insights into its ecological roles, such as nutrient cycling or its position in the food web. The single replicon may also reflect adaptations to specific environmental pressures, offering clues to the evolutionary strategies employed by this bacterium within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia sp. ESNIH1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia sp. ESNIH1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia sp. ESNIH1 NODE_51, whole genome shotgun sequence.

Gene Summary

Adenine Count

1010804 bp

Thymine Count

1013856 bp

Guanine Count

1300740 bp

Cytosine Count

1312436 bp

Genome Length

4637836 bp

Protein-coding Genes

4137 genes

Non-Coding Genes

326 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC3369_22420Not AvailablePositive4543089 - 454370922491.9
lysr family transcriptional regulatorC3369_22430Not AvailableNegative4544127 - 454501133276.1
alpha/beta hydrolaseC3369_22435Not AvailablePositive4545211 - 454634741405.2
aldehyde dehydrogenaseC3369_22440Not AvailableNegative4546704 - 454783740303.0
hypothetical proteinC3369_22445Not AvailablePositive4547867 - 454817811871.4
n-acetyltransferaseC3369_22450Not AvailableNegative4548297 - 454871915629.1
hypothetical proteinC3369_22455Not AvailablePositive4549298 - 455003828085.9
hypothetical proteinC3369_22460Not AvailablePositive4550375 - 455079715232.9
virulence-associated protein vagcC3369_22465Not AvailablePositive4551297 - 45515278738.31
vapc toxin family pin domain ribonucleaseC3369_22470Not AvailablePositive4551524 - 455194015078.3

Displaying genes 4381 – 4390 of 4463 in total

Metabolites

146 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 146 metabolites

Health Effects

No health effects information available for this bacterium.