Pseudomonas sp. 1239

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 1239 is characterized by a single replicon, indicating a streamlined genomic organization. This bacterium has been sequenced and is documented under the accession number NFSA00000000.1. The presence of only one replicon suggests that Pseudomonas sp. 1239 may possess certain advantages in terms of genetic stability and replication efficiency, which can be critical for adaptation to various environmental conditions. Pseudomonas species are known for their versatility and ability to thrive in diverse habitats. This particular strain may share similar ecological traits, potentially including roles in nutrient cycling or bioremediation processes, although specific ecological functions are not detailed in the provided information. The single replicon may also facilitate faster growth rates under optimal conditions, contributing to its survival and competitive edge in challenging environments. Overall, the genomic simplicity of Pseudomonas sp. 1239, as indicated by its single replicon, may serve as a foundation for further studies on its ecological roles and potential applications in biotechnology or environmental management. Understanding its genetic makeup could reveal insights into its adaptability and functional capabilities in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 1239
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 1239
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 1239 Contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080483 bp

Thymine Count

1086790 bp

Guanine Count

1930258 bp

Cytosine Count

1926868 bp

Genome Length

6024399 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetate--coa ligaseB8W70_03550Not AvailableNegative774631 - 77656571127.5
glucose-6-phosphate isomeraseB8W70_03555Not AvailableNegative776698 - 77836261378.2
pantoate--beta-alanine ligaseB8W70_03560Not AvailableNegative778466 - 77932331024.5
3-methyl-2-oxobutanoate hydroxymethyltransferaseB8W70_03565Not AvailableNegative779320 - 78012027697.9
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseB8W70_03570Not AvailableNegative780371 - 78084717415.0
polynucleotide adenylyltransferase pcnbB8W70_03575Not AvailableNegative780854 - 78223952784.2
response regulatorB8W70_03580Not AvailableNegative782937 - 78437352192.2
trna glutamyl-q(34) synthetase gluqrsB8W70_03590Not AvailableNegative787752 - 78863932807.1
rna polymerase-binding protein dksaB8W70_03595Not AvailableNegative788706 - 78915217163.3
aminotransferaseB8W70_03600Not AvailablePositive789363 - 79053542519.6

Displaying genes 781 – 790 of 5415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.