Pseudomonas sp. 1239

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 1239 is characterized by a single replicon, indicating a streamlined genomic organization. This bacterium has been sequenced and is documented under the accession number NFSA00000000.1. The presence of only one replicon suggests that Pseudomonas sp. 1239 may possess certain advantages in terms of genetic stability and replication efficiency, which can be critical for adaptation to various environmental conditions. Pseudomonas species are known for their versatility and ability to thrive in diverse habitats. This particular strain may share similar ecological traits, potentially including roles in nutrient cycling or bioremediation processes, although specific ecological functions are not detailed in the provided information. The single replicon may also facilitate faster growth rates under optimal conditions, contributing to its survival and competitive edge in challenging environments. Overall, the genomic simplicity of Pseudomonas sp. 1239, as indicated by its single replicon, may serve as a foundation for further studies on its ecological roles and potential applications in biotechnology or environmental management. Understanding its genetic makeup could reveal insights into its adaptability and functional capabilities in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 1239
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 1239
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 1239 Contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080483 bp

Thymine Count

1086790 bp

Guanine Count

1930258 bp

Cytosine Count

1926868 bp

Genome Length

6024399 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginyltransferaseB8W70_19270Not AvailablePositive4145344 - 414605127726.2
translation initiation factor if-1B8W70_19275Not AvailablePositive4146153 - 41463718303.06
atp-dependent clp protease atp-binding subunit clpaB8W70_19280Not AvailableNegative4146502 - 414877283293.7
atp-dependent clp protease adaptor clpsB8W70_19285Not AvailableNegative4148803 - 414916513623.2
cold shock domain protein cspdB8W70_19290Not AvailablePositive4149394 - 41496489048.64
isocitrate dehydrogenase (nadp(+))B8W70_19295Not AvailableNegative4149710 - 415096645538.0
isocitrate dehydrogenase, nadp-dependentB8W70_19300Not AvailablePositive4151385 - 415361080261.8
nudix hydrolaseB8W70_19305Not AvailablePositive4153773 - 415421316645.7
trna(5-methylaminomethyl-2-thiouridylate)- methyltransferaseB8W70_19310Not AvailablePositive4154287 - 415540841649.3
lysogenization protein hfldB8W70_19315Not AvailablePositive4155408 - 415602822993.1

Displaying genes 3771 – 3780 of 5415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.