Pseudomonas sp. 1239

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 1239 is characterized by a single replicon, indicating a streamlined genomic organization. This bacterium has been sequenced and is documented under the accession number NFSA00000000.1. The presence of only one replicon suggests that Pseudomonas sp. 1239 may possess certain advantages in terms of genetic stability and replication efficiency, which can be critical for adaptation to various environmental conditions. Pseudomonas species are known for their versatility and ability to thrive in diverse habitats. This particular strain may share similar ecological traits, potentially including roles in nutrient cycling or bioremediation processes, although specific ecological functions are not detailed in the provided information. The single replicon may also facilitate faster growth rates under optimal conditions, contributing to its survival and competitive edge in challenging environments. Overall, the genomic simplicity of Pseudomonas sp. 1239, as indicated by its single replicon, may serve as a foundation for further studies on its ecological roles and potential applications in biotechnology or environmental management. Understanding its genetic makeup could reveal insights into its adaptability and functional capabilities in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 1239
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 1239
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 1239 Contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080483 bp

Thymine Count

1086790 bp

Guanine Count

1930258 bp

Cytosine Count

1926868 bp

Genome Length

6024399 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polymeraseB8W70_14845Not AvailablePositive3157819 - 315898843041.9
lipid a export permease/atp-binding protein msbaB8W70_14850Not AvailablePositive3159004 - 316081266424.9
bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferaseB8W70_14855Not AvailablePositive3160935 - 316235649959.3
metal abc transporter atpaseB8W70_14860Not AvailableNegative3162393 - 316334636327.0
aldo/keto reductaseB8W70_14865Not AvailableNegative3163387 - 316419929288.0
fad-dependent oxidoreductaseB8W70_14870Not AvailableNegative3164196 - 316537141716.4
qace family quaternary ammonium compound efflux smr transporterB8W70_14875Not AvailableNegative3165440 - 316577211559.0
lysr family transcriptional regulatorB8W70_14880Not AvailablePositive3165858 - 316674833360.2
3-deoxy-d-manno-octulosonic acid transferaseB8W70_14885Not AvailablePositive3166763 - 316803746489.1
channel protein tolcB8W70_14890Not AvailableNegative3168116 - 316954652672.3

Displaying genes 2981 – 2990 of 5415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.