Pseudomonas sp. 1239

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 1239 is characterized by a single replicon, indicating a streamlined genomic organization. This bacterium has been sequenced and is documented under the accession number NFSA00000000.1. The presence of only one replicon suggests that Pseudomonas sp. 1239 may possess certain advantages in terms of genetic stability and replication efficiency, which can be critical for adaptation to various environmental conditions. Pseudomonas species are known for their versatility and ability to thrive in diverse habitats. This particular strain may share similar ecological traits, potentially including roles in nutrient cycling or bioremediation processes, although specific ecological functions are not detailed in the provided information. The single replicon may also facilitate faster growth rates under optimal conditions, contributing to its survival and competitive edge in challenging environments. Overall, the genomic simplicity of Pseudomonas sp. 1239, as indicated by its single replicon, may serve as a foundation for further studies on its ecological roles and potential applications in biotechnology or environmental management. Understanding its genetic makeup could reveal insights into its adaptability and functional capabilities in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 1239
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 1239
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 1239 Contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080483 bp

Thymine Count

1086790 bp

Guanine Count

1930258 bp

Cytosine Count

1926868 bp

Genome Length

6024399 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin-arginine translocase subunit tatcB8W70_12625Not AvailablePositive2656470 - 265721627342.6
ngg1p interacting factor nif3B8W70_12630Not AvailableNegative2657263 - 265757411151.2
phosphoribosylformylglycinamidine synthaseB8W70_12635Not AvailableNegative2657577 - 2661476140560.0
lytic transglycosylase fB8W70_12640Not AvailablePositive2661713 - 266317355105.6
pp_02478B8W70_12645Not AvailableNegative2663258 - 2663740Not Available
copper oxidaseB8W70_12650Not AvailableNegative2663740 - 266512251155.2
hypothetical proteinB8W70_12655Not AvailablePositive2665338 - 2668238107872.0
hypothetical proteinB8W70_12660Not AvailablePositive2668370 - 2671300108164.0
gamma-aminobutyraldehyde dehydrogenaseB8W70_12665Not AvailableNegative2671396 - 267282050664.6
amino acid permeaseB8W70_12670Not AvailableNegative2672941 - 267427247327.5

Displaying genes 2541 – 2550 of 5415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.