Pseudomonas sp. 1239

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 1239 is characterized by a single replicon, indicating a streamlined genomic organization. This bacterium has been sequenced and is documented under the accession number NFSA00000000.1. The presence of only one replicon suggests that Pseudomonas sp. 1239 may possess certain advantages in terms of genetic stability and replication efficiency, which can be critical for adaptation to various environmental conditions. Pseudomonas species are known for their versatility and ability to thrive in diverse habitats. This particular strain may share similar ecological traits, potentially including roles in nutrient cycling or bioremediation processes, although specific ecological functions are not detailed in the provided information. The single replicon may also facilitate faster growth rates under optimal conditions, contributing to its survival and competitive edge in challenging environments. Overall, the genomic simplicity of Pseudomonas sp. 1239, as indicated by its single replicon, may serve as a foundation for further studies on its ecological roles and potential applications in biotechnology or environmental management. Understanding its genetic makeup could reveal insights into its adaptability and functional capabilities in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 1239
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 1239
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 1239 Contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080483 bp

Thymine Count

1086790 bp

Guanine Count

1930258 bp

Cytosine Count

1926868 bp

Genome Length

6024399 bp

Protein-coding Genes

5263 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydroxymethyltransferaseB8W70_07525Not AvailablePositive1616109 - 161736244895.4
sarcosine oxidase subunit betaB8W70_07530Not AvailablePositive1617378 - 161862845293.1
sarcosine oxidase subunit deltaB8W70_07535Not AvailablePositive1618642 - 161897112457.5
sarcosine oxidase subunit alphaB8W70_07540Not AvailablePositive1618968 - 1621985109194.0
sarcosine oxidase subunit gammaB8W70_07545Not AvailablePositive1622116 - 162274823063.5
formyltetrahydrofolate deformylaseB8W70_07550Not AvailablePositive1622745 - 162360232389.8
formaldehyde dehydrogenase, glutathione-independentB8W70_07555Not AvailablePositive1623703 - 162490241980.5
membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate familyB8W70_07560Not AvailablePositive1625098 - 162745283868.5
hypothetical proteinB8W70_07565Not AvailablePositive1627626 - 162819218816.4
duf350 domain-containing proteinB8W70_07570Not AvailablePositive1628264 - 162869214842.6

Displaying genes 1561 – 1570 of 5415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.