Sphingomonas sp. IBVSS1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. IBVSS1 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genomic organization that is typical for many bacteria within the Sphingomonas genus. The specific accession number for this strain is NFUS00000000.1, which can be used for further genomic and taxonomic reference. Sphingomonas species are often noted for their diverse metabolic capabilities and adaptability to various environments, including soil and aquatic ecosystems. This adaptability is crucial for their survival and ecological roles, such as participating in biogeochemical cycles and degrading complex organic compounds. The presence of flagella suggests that Sphingomonas sp. IBVSS1 may be capable of active movement toward nutrient sources or away from harmful substances, enhancing its ecological fitness. In summary, Sphingomonas sp. IBVSS1 exhibits traits typical of its genus, including its rod shape, motility through flagella, and a single replicon. These characteristics may contribute to its ecological roles, particularly in nutrient cycling and biodegradation processes, highlighting the importance of such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. IBVSS1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. IBVSS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. IBVSS1 contig000011, whole genome shotgun

Gene Summary

Adenine Count

522457 bp

Thymine Count

526457 bp

Guanine Count

1054183 bp

Cytosine Count

1044390 bp

Genome Length

3147622 bp

Protein-coding Genes

2900 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
had family hydrolaseCAP39_03950Not AvailableNegative830934 - 83156321883.2
malate synthase aCAP39_03955Not AvailableNegative831834 - 83344759422.0
hypothetical proteinCAP39_03960Not AvailablePositive833468 - 83399818756.7
isocitrate lyaseCAP39_03970Not AvailablePositive835585 - 83717758539.1
atpaseCAP39_03975Not AvailableNegative837499 - 83909158369.2
gluconolaconaseCAP39_03980Not AvailablePositive839208 - 84013432655.7
epoxide hydrolaseCAP39_03985Not AvailablePositive840134 - 84098531746.3
dna polymerase iCAP39_03990Not AvailableNegative841121 - 843877100126.0
3-isopropylmalate dehydratase small subunitCAP39_03995Not AvailablePositive843993 - 84458320844.1
dna-binding proteinCAP39_04000Not AvailableNegative844758 - 84607746501.9

Displaying genes 801 – 810 of 2956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.