Sphingomonas sp. IBVSS1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. IBVSS1 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genomic organization that is typical for many bacteria within the Sphingomonas genus. The specific accession number for this strain is NFUS00000000.1, which can be used for further genomic and taxonomic reference. Sphingomonas species are often noted for their diverse metabolic capabilities and adaptability to various environments, including soil and aquatic ecosystems. This adaptability is crucial for their survival and ecological roles, such as participating in biogeochemical cycles and degrading complex organic compounds. The presence of flagella suggests that Sphingomonas sp. IBVSS1 may be capable of active movement toward nutrient sources or away from harmful substances, enhancing its ecological fitness. In summary, Sphingomonas sp. IBVSS1 exhibits traits typical of its genus, including its rod shape, motility through flagella, and a single replicon. These characteristics may contribute to its ecological roles, particularly in nutrient cycling and biodegradation processes, highlighting the importance of such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. IBVSS1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. IBVSS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. IBVSS1 contig000011, whole genome shotgun

Gene Summary

Adenine Count

522457 bp

Thymine Count

526457 bp

Guanine Count

1054183 bp

Cytosine Count

1044390 bp

Genome Length

3147622 bp

Protein-coding Genes

2900 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCAP39_07885Not AvailablePositive1688664 - 168902012367.5
hypothetical proteinCAP39_07890Not AvailablePositive1689133 - 168994828368.6
hypothetical proteinCAP39_07895Not AvailablePositive1689977 - 169256589938.8
hypothetical proteinCAP39_07900Not AvailableNegative1693078 - 16933268586.65
hypothetical proteinCAP39_07905Not AvailablePositive1693398 - 169409327217.8
hypothetical proteinCAP39_07910Not AvailablePositive1694356 - 16945808175.94
Trna-leuNot AvailableNot AvailablePositive1695123 - 1695207Not Available
hypothetical proteinCAP39_07925Not AvailablePositive1695354 - 1698461110518.0
pseudouridine synthaseCAP39_07930Not AvailablePositive1698899 - 169965427272.4
16s rrna (guanine(966)-n(2))-methyltransferase rsmdCAP39_07935Not AvailablePositive1699654 - 170018718325.2

Displaying genes 1581 – 1590 of 2956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.