Sphingomonas sp. IBVSS1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. IBVSS1 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism has a single replicon, indicating a streamlined genomic organization that is typical for many bacteria within the Sphingomonas genus. The specific accession number for this strain is NFUS00000000.1, which can be used for further genomic and taxonomic reference. Sphingomonas species are often noted for their diverse metabolic capabilities and adaptability to various environments, including soil and aquatic ecosystems. This adaptability is crucial for their survival and ecological roles, such as participating in biogeochemical cycles and degrading complex organic compounds. The presence of flagella suggests that Sphingomonas sp. IBVSS1 may be capable of active movement toward nutrient sources or away from harmful substances, enhancing its ecological fitness. In summary, Sphingomonas sp. IBVSS1 exhibits traits typical of its genus, including its rod shape, motility through flagella, and a single replicon. These characteristics may contribute to its ecological roles, particularly in nutrient cycling and biodegradation processes, highlighting the importance of such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. IBVSS1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. IBVSS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. IBVSS1 contig000011, whole genome shotgun

Gene Summary

Adenine Count

522457 bp

Thymine Count

526457 bp

Guanine Count

1054183 bp

Cytosine Count

1044390 bp

Genome Length

3147622 bp

Protein-coding Genes

2900 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCAP39_07480Not AvailableNegative1601175 - 160358686469.2
3-isopropylmalate dehydratase large subunitCAP39_07485Not AvailableNegative1603767 - 160518249996.9
cysteine desulfurase-like proteinCAP39_07490Not AvailableNegative1605232 - 160648543781.4
holliday junction branch migration dna helicase ruvbCAP39_07495Not AvailableNegative1606482 - 160749536534.5
holliday junction branch migration protein ruvaCAP39_07500Not AvailableNegative1607492 - 160809119967.2
crossover junction endodeoxyribonuclease ruvcCAP39_07505Not AvailableNegative1608088 - 160858217249.3
hypothetical proteinCAP39_07510Not AvailableNegative1608582 - 160896814099.8
yebc/pmpr family dna-binding transcriptional regulatorCAP39_07515Not AvailableNegative1609054 - 160979426198.8
carbon monoxide dehydrogenaseCAP39_07520Not AvailableNegative1609857 - 161062426025.0
carbon monoxide dehydrogenaseCAP39_07525Not AvailableNegative1610617 - 161109316343.0

Displaying genes 1501 – 1510 of 2956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.