Sphingobium sp. LB126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. LB126 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can be advantageous for the bacterium in navigating its environment, potentially aiding in the colonization of surfaces or the search for nutrients. Furthermore, Sphingobium sp. LB126 consists of a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and adaptability. The genomic data for Sphingobium sp. LB126 is cataloged under the accession number NETV00000000.1, which facilitates further research and exploration of its genetic makeup. Understanding its genomic characteristics can provide insights into its ecological roles and interactions within its habitat. Given its motility and genetic traits, Sphingobium sp. LB126 may play a significant role in bioremediation processes, particularly in environments contaminated with organic pollutants. The ability to move towards and metabolize such compounds could be crucial for its survival and ecological function. Overall, the traits of Sphingobium sp. LB126 highlight its potential as a microbial agent in environmental cleanup applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. LB126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. LB126


Gene Summary

Adenine Count

1026363 bp

Thymine Count

1026739 bp

Guanine Count

1780709 bp

Cytosine Count

1793585 bp

Genome Length

5627691 bp

Protein-coding Genes

5005 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligaseCAF53_15520Not AvailableNegative3174088 - 317565058083.5
dna polymerase iii subunit delta'CAF53_15525Not AvailableNegative3175694 - 317665634269.3
dtmp kinaseCAF53_15530Not AvailableNegative3176653 - 317729122850.2
d-alanyl-d-alanine carboxypeptidaseCAF53_15535Not AvailableNegative3177288 - 317845141336.8
lytic transglycosylaseCAF53_15540Not AvailableNegative3178519 - 317955637937.3
Trna-serNot AvailableNot AvailablePositive3179706 - 3179795Not Available
hypothetical proteinCAF53_15550Not AvailablePositive3179948 - 31801517547.96
hypothetical proteinCAF53_15555Not AvailablePositive3180487 - 318094216570.3
preprotein translocase subunit secaCAF53_15560Not AvailableNegative3181003 - 3183732102460.0
glycosyl transferaseCAF53_15565Not AvailablePositive3183966 - 318549254609.9

Displaying genes 3081 – 3090 of 5124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.