Sphingobium sp. LB126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. LB126 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can be advantageous for the bacterium in navigating its environment, potentially aiding in the colonization of surfaces or the search for nutrients. Furthermore, Sphingobium sp. LB126 consists of a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and adaptability. The genomic data for Sphingobium sp. LB126 is cataloged under the accession number NETV00000000.1, which facilitates further research and exploration of its genetic makeup. Understanding its genomic characteristics can provide insights into its ecological roles and interactions within its habitat. Given its motility and genetic traits, Sphingobium sp. LB126 may play a significant role in bioremediation processes, particularly in environments contaminated with organic pollutants. The ability to move towards and metabolize such compounds could be crucial for its survival and ecological function. Overall, the traits of Sphingobium sp. LB126 highlight its potential as a microbial agent in environmental cleanup applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. LB126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. LB126


Gene Summary

Adenine Count

1026363 bp

Thymine Count

1026739 bp

Guanine Count

1780709 bp

Cytosine Count

1793585 bp

Genome Length

5627691 bp

Protein-coding Genes

5005 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
agmatine deiminaseCAF53_15020Not AvailableNegative3075201 - 307618434818.0
hypothetical proteinCAF53_15025Not AvailablePositive3076343 - 307686419120.5
peptidase m28CAF53_15030Not AvailableNegative3077162 - 307881759191.0
s9 family peptidaseCAF53_15035Not AvailablePositive3078962 - 308092370412.6
30s ribosomal protein s4CAF53_15040Not AvailableNegative3080990 - 308160423121.1
chorismate mutaseCAF53_15045Not AvailablePositive3081782 - 308207810944.1
rrna methyltransferaseCAF53_15050Not AvailableNegative3082118 - 308284625899.1
transcriptional regulator nrdrCAF53_15055Not AvailableNegative3082839 - 308330017380.6
serine hydroxymethyltransferaseCAF53_15060Not AvailableNegative3083307 - 308462046144.0
ribose 5-phosphate isomerase bCAF53_15065Not AvailableNegative3084632 - 308506914942.8

Displaying genes 2981 – 2990 of 5124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.