Sphingobium sp. LB126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. LB126 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can be advantageous for the bacterium in navigating its environment, potentially aiding in the colonization of surfaces or the search for nutrients. Furthermore, Sphingobium sp. LB126 consists of a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and adaptability. The genomic data for Sphingobium sp. LB126 is cataloged under the accession number NETV00000000.1, which facilitates further research and exploration of its genetic makeup. Understanding its genomic characteristics can provide insights into its ecological roles and interactions within its habitat. Given its motility and genetic traits, Sphingobium sp. LB126 may play a significant role in bioremediation processes, particularly in environments contaminated with organic pollutants. The ability to move towards and metabolize such compounds could be crucial for its survival and ecological function. Overall, the traits of Sphingobium sp. LB126 highlight its potential as a microbial agent in environmental cleanup applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. LB126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. LB126


Gene Summary

Adenine Count

1026363 bp

Thymine Count

1026739 bp

Guanine Count

1780709 bp

Cytosine Count

1793585 bp

Genome Length

5627691 bp

Protein-coding Genes

5005 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
host attachment proteinCAF53_13250Not AvailablePositive2705375 - 270581516371.3
rna polymerase-binding protein dksaCAF53_13260Not AvailablePositive2707143 - 270760717839.8
pilus assembly protein pilzCAF53_13265Not AvailablePositive2707673 - 270803813350.9
duf465 domain-containing proteinCAF53_13270Not AvailableNegative2708376 - 27085375932.24
duf465 domain-containing proteinCAF53_13275Not AvailablePositive2708746 - 27089256811.45
hypothetical proteinCAF53_13280Not AvailablePositive2709036 - 270953618559.1
hypothetical proteinCAF53_13285Not AvailablePositive2709664 - 271173974888.6
hypothetical proteinCAF53_13290Not AvailablePositive2711739 - 2715920147469.0
l-serine ammonia-lyaseCAF53_13295Not AvailablePositive2715924 - 271731848777.6
hypothetical proteinCAF53_13300Not AvailablePositive2717490 - 271814323130.7

Displaying genes 2631 – 2640 of 5124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.