Sphingobium sp. LB126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. LB126 is characterized by the presence of flagella, which suggests that it has the capability for motility. This trait can be advantageous for the bacterium in navigating its environment, potentially aiding in the colonization of surfaces or the search for nutrients. Furthermore, Sphingobium sp. LB126 consists of a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and adaptability. The genomic data for Sphingobium sp. LB126 is cataloged under the accession number NETV00000000.1, which facilitates further research and exploration of its genetic makeup. Understanding its genomic characteristics can provide insights into its ecological roles and interactions within its habitat. Given its motility and genetic traits, Sphingobium sp. LB126 may play a significant role in bioremediation processes, particularly in environments contaminated with organic pollutants. The ability to move towards and metabolize such compounds could be crucial for its survival and ecological function. Overall, the traits of Sphingobium sp. LB126 highlight its potential as a microbial agent in environmental cleanup applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. LB126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. LB126


Gene Summary

Adenine Count

1026363 bp

Thymine Count

1026739 bp

Guanine Count

1780709 bp

Cytosine Count

1793585 bp

Genome Length

5627691 bp

Protein-coding Genes

5005 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
patatinCAF53_00860Not AvailableNegative172503 - 17484286499.5
endonucleaseCAF53_00865Not AvailableNegative174886 - 17563227668.7
dna repair protein radaCAF53_00870Not AvailablePositive175674 - 17704147713.4
colicin v production proteinCAF53_00875Not AvailablePositive177053 - 17756818089.2
protein tyrosine kinaseCAF53_00880Not AvailableNegative177664 - 17977875256.5
polysaccharide transporterCAF53_00885Not AvailableNegative179778 - 18047023534.9
udp-n-acetyl-d-mannosamine dehydrogenaseCAF53_00890Not AvailableNegative180612 - 18190746912.6
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)CAF53_00895Not AvailableNegative182004 - 18314340783.2
udp-glucose 6-dehydrogenaseCAF53_00900Not AvailablePositive183301 - 18462046475.0
multidrug abc transporter permeaseCAF53_00905Not AvailableNegative184783 - 18563130509.1

Displaying genes 251 – 260 of 5124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.