Pelagibaca sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagibaca

Description

Pelagibaca sp. is a marine bacterium characterized by having a single replicon, which is indicative of its genetic organization. The genomic data for this organism is publicly accessible under the accession number NYZS00000000.1. As a member of the marine microbial community, Pelagibaca sp. plays a role in various ecological processes, including nutrient cycling in oceanic environments. The single replicon structure suggests a streamlined genomic architecture that may contribute to its adaptability and efficiency in utilizing available resources in marine ecosystems. This bacterium's specific ecological niche and interactions with other marine organisms remain to be fully elucidated; however, its presence highlights the diversity of microbial life in ocean habitats and the potential functional roles such organisms may fulfill within their ecosystems. Understanding Pelagibaca sp. and its ecological significance can provide insights into marine microbiomes and their contributions to ocean health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagibaca
SpeciesPelagibaca sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibaca sp. isolate ARS5 MHASMcontig_462408, whole genome

Gene Summary

Adenine Count

1019353 bp

Thymine Count

1024340 bp

Guanine Count

1772377 bp

Cytosine Count

1778886 bp

Genome Length

5608188 bp

Protein-coding Genes

5035 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-hexosaminidaseCMI67_19305Not AvailableNegative4035702 - 403670935946.4
sporulation proteinCMI67_19310Not AvailableNegative4036706 - 403771334619.4
arginine--trna ligaseCMI67_19315Not AvailableNegative4037798 - 403954063253.4
sodium:proton exchangerCMI67_19320Not AvailableNegative4039811 - 404166765867.0
deoxyguanosinetriphosphate triphosphohydrolaseCMI67_19325Not AvailableNegative4041800 - 404297243918.0
iron-sulfur cluster assembly accessory proteinCMI67_19330Not AvailablePositive4043086 - 404340911372.4
aldehyde dehydrogenase family proteinCMI67_19335Not AvailableNegative4043529 - 404505253018.4
cyclodeaminaseCMI67_19340Not AvailableNegative4045167 - 404612333393.2
lrp/asnc family transcriptional regulatorCMI67_19345Not AvailablePositive4046257 - 404674217999.8
dihydrodipicolinate synthase family proteinCMI67_19350Not AvailableNegative4047021 - 404769223606.2

Displaying genes 3791 – 3800 of 5096 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.