Pelagibaca sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagibaca

Description

Pelagibaca sp. is a marine bacterium characterized by having a single replicon, which is indicative of its genetic organization. The genomic data for this organism is publicly accessible under the accession number NYZS00000000.1. As a member of the marine microbial community, Pelagibaca sp. plays a role in various ecological processes, including nutrient cycling in oceanic environments. The single replicon structure suggests a streamlined genomic architecture that may contribute to its adaptability and efficiency in utilizing available resources in marine ecosystems. This bacterium's specific ecological niche and interactions with other marine organisms remain to be fully elucidated; however, its presence highlights the diversity of microbial life in ocean habitats and the potential functional roles such organisms may fulfill within their ecosystems. Understanding Pelagibaca sp. and its ecological significance can provide insights into marine microbiomes and their contributions to ocean health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagibaca
SpeciesPelagibaca sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibaca sp. isolate ARS5 MHASMcontig_462408, whole genome

Gene Summary

Adenine Count

1019353 bp

Thymine Count

1024340 bp

Guanine Count

1772377 bp

Cytosine Count

1778886 bp

Genome Length

5608188 bp

Protein-coding Genes

5035 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-carboxy-cis,cis-muconate cycloisomeraseCMI67_16825Not AvailablePositive3542969 - 354402136851.4
4-hydroxybenzoate 3-monooxygenaseCMI67_16830Not AvailableNegative3544137 - 354531543695.9
arac family transcriptional regulatorCMI67_16835Not AvailablePositive3545409 - 354627230953.0
3-keto-5-aminohexanoate cleavage proteinCMI67_16840Not AvailableNegative3546609 - 35467143740.52
abc transporter atp-binding proteinCMI67_16845Not AvailablePositive3546715 - 354701410705.8
hypothetical proteinCMI67_16850Not AvailablePositive3547018 - 354740112939.8
paraquat-inducible membrane protein aCMI67_16855Not AvailablePositive3547406 - 354787316672.1
dna repair proteinCMI67_16860Not AvailablePositive3548036 - 354889332134.3
dna repair protein radaCMI67_16865Not AvailablePositive3548951 - 355031547211.8
colicin v production cvpaCMI67_16870Not AvailablePositive3550356 - 355092820068.6

Displaying genes 3311 – 3320 of 5096 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.