Pelagibaca sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagibaca

Description

Pelagibaca sp. is a marine bacterium characterized by having a single replicon, which is indicative of its genetic organization. The genomic data for this organism is publicly accessible under the accession number NYZS00000000.1. As a member of the marine microbial community, Pelagibaca sp. plays a role in various ecological processes, including nutrient cycling in oceanic environments. The single replicon structure suggests a streamlined genomic architecture that may contribute to its adaptability and efficiency in utilizing available resources in marine ecosystems. This bacterium's specific ecological niche and interactions with other marine organisms remain to be fully elucidated; however, its presence highlights the diversity of microbial life in ocean habitats and the potential functional roles such organisms may fulfill within their ecosystems. Understanding Pelagibaca sp. and its ecological significance can provide insights into marine microbiomes and their contributions to ocean health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagibaca
SpeciesPelagibaca sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibaca sp. isolate ARS5 MHASMcontig_462408, whole genome

Gene Summary

Adenine Count

1019353 bp

Thymine Count

1024340 bp

Guanine Count

1772377 bp

Cytosine Count

1778886 bp

Genome Length

5608188 bp

Protein-coding Genes

5035 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit epsilonCMI67_10755Not AvailablePositive2288510 - 228894415420.2
hypothetical proteinCMI67_10760Not AvailablePositive2289122 - 228947213299.6
phosphoribosylpyrophosphate synthetaseCMI67_10765Not AvailableNegative2289634 - 229064436287.1
2-hydroxychromene-2-carboxylate isomeraseCMI67_10770Not AvailablePositive2290746 - 229134521425.5
cysteine methyltransferaseCMI67_10775Not AvailableNegative2291613 - 229212217952.5
transcriptional regulatorCMI67_10780Not AvailableNegative2292119 - 229267920243.4
acyl-phosphate glycerol 3-phosphate acyltransferaseCMI67_10785Not AvailableNegative2292755 - 229337221627.1
dihydroorotaseCMI67_10790Not AvailableNegative2293372 - 229465545374.3
hypothetical proteinCMI67_10795Not AvailableNegative2294743 - 229515614454.6
aspartate carbamoyltransferase catalytic subunitCMI67_10800Not AvailableNegative2295153 - 229570119458.6

Displaying genes 2131 – 2140 of 5096 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.