Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pelagibaca
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pelagibaca |
| Species | Pelagibaca sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019353 bp
Thymine Count
1024340 bp
Guanine Count
1772377 bp
Cytosine Count
1778886 bp
Genome Length
5608188 bp
Protein-coding Genes
5035 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-5-aminohexanoate cleavage protein | CMI67_09080 | Not Available | Negative | 1892046 - 1892882 | 30258.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | CMI67_09085 | Not Available | Negative | 1892943 - 1893635 | 25495.9 |
| protocatechuate 3,4-dioxygenase subunit beta | CMI67_09090 | Not Available | Negative | 1893640 - 1894365 | 27192.1 |
| 4-carboxymuconolactone decarboxylase | CMI67_09095 | Not Available | Negative | 1894362 - 1894748 | 14170.7 |
| 3-oxoadipate enol-lactonase | CMI67_09100 | Not Available | Negative | 1894741 - 1895529 | 27996.9 |
| pca operon transcription factor pcaq | CMI67_09105 | Not Available | Positive | 1895715 - 1896629 | 33313.6 |
| transcriptional regulator | CMI67_09110 | Not Available | Positive | 1896775 - 1897275 | 17645.5 |
| transcriptional regulator | CMI67_09115 | Not Available | Positive | 1897465 - 1897941 | 16659.2 |
| c4-dicarboxylate abc transporter substrate-binding protein | CMI67_09120 | Not Available | Positive | 1897990 - 1899093 | 39248.2 |
| c4-dicarboxylate abc transporter | CMI67_09125 | Not Available | Positive | 1899170 - 1899709 | 20127.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
