Pelagibaca sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagibaca

Description

Pelagibaca sp. is a marine bacterium characterized by having a single replicon, which is indicative of its genetic organization. The genomic data for this organism is publicly accessible under the accession number NYZS00000000.1. As a member of the marine microbial community, Pelagibaca sp. plays a role in various ecological processes, including nutrient cycling in oceanic environments. The single replicon structure suggests a streamlined genomic architecture that may contribute to its adaptability and efficiency in utilizing available resources in marine ecosystems. This bacterium's specific ecological niche and interactions with other marine organisms remain to be fully elucidated; however, its presence highlights the diversity of microbial life in ocean habitats and the potential functional roles such organisms may fulfill within their ecosystems. Understanding Pelagibaca sp. and its ecological significance can provide insights into marine microbiomes and their contributions to ocean health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagibaca
SpeciesPelagibaca sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibaca sp. isolate ARS5 MHASMcontig_462408, whole genome

Gene Summary

Adenine Count

1019353 bp

Thymine Count

1024340 bp

Guanine Count

1772377 bp

Cytosine Count

1778886 bp

Genome Length

5608188 bp

Protein-coding Genes

5035 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMI67_06760Not AvailablePositive1392038 - 13922387298.78
short-chain dehydrogenaseCMI67_06765Not AvailablePositive1392298 - 139313130921.2
hypothetical proteinCMI67_06770Not AvailablePositive1393192 - 13933957386.57
atp:cob(i)alamin adenosyltransferaseCMI67_06775Not AvailablePositive1393398 - 139397020914.8
succinyl-diaminopimelate desuccinylaseCMI67_06780Not AvailableNegative1394360 - 139563746758.6
hypothetical proteinCMI67_06785Not AvailableNegative1395774 - 139670333514.5
gamma-glutamylcyclotransferaseCMI67_06790Not AvailablePositive1396793 - 139733519876.5
biopolymer transporter exbbCMI67_06795Not AvailablePositive1397390 - 139862244770.1
flagellar motor proteinCMI67_06800Not AvailablePositive1398626 - 140053069730.2
phosphoserine phosphatase serbCMI67_06805Not AvailablePositive1400645 - 140151430471.8

Displaying genes 1351 – 1360 of 5096 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.