Sphingomonas crocodyli

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas crocodyli is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Sphingomonas crocodyli can be referenced under the accession number SACN00000000.1, providing a basis for further study and classification. The ecological significance of Sphingomonas crocodyli lies in its potential role in biogeochemical cycles and its interactions within microbial communities. Given its rod shape and motility, Sphingomonas crocodyli may be well-suited for colonizing diverse substrates, including aquatic environments. This adaptability could enable it to participate in the degradation of organic pollutants or other complex compounds, contributing to nutrient cycling and ecosystem health. Further research into Sphingomonas crocodyli could reveal more about its ecological roles, metabolic capabilities, and potential applications in bioremediation or biotechnology. Understanding the characteristics of this bacterium enhances our knowledge of microbial diversity and the functions of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas crocodyli
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas crocodyli
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas crocodyli strain CCP-7 NODE_8_length_5669_cov_137,

Gene Summary

Adenine Count

864104 bp

Thymine Count

867777 bp

Guanine Count

1579726 bp

Cytosine Count

1572024 bp

Genome Length

4884161 bp

Protein-coding Genes

4559 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorEOD43_20935Not AvailablePositive4360762 - 436319487216.9
energy transducer tonbEOD43_20940Not AvailablePositive4363632 - 436434825501.4
fe2+-dependent dioxygenaseEOD43_20945Not AvailablePositive4364356 - 436503925054.8
hypothetical proteinEOD43_20950Not AvailablePositive4365179 - 43653646903.03
antibiotic biosynthesis monooxygenaseEOD43_20955Not AvailableNegative4365361 - 436569612743.9
dna ligase dEOD43_20960Not AvailableNegative4365699 - 436818591537.3
ku proteinEOD43_20965Not AvailableNegative4368190 - 436905332011.8
methyl-accepting chemotaxis proteinEOD43_20970Not AvailablePositive4369194 - 437061251088.4
cisplatin damage response atp-dependent dna ligaseEOD43_20975Not AvailableNegative4370616 - 437222658991.4
ligase-associated dna damage response exonucleaseEOD43_20980Not AvailableNegative4372302 - 437329436251.1

Displaying genes 4141 – 4150 of 4632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.