Sphingomonas crocodyli

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas crocodyli is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Sphingomonas crocodyli can be referenced under the accession number SACN00000000.1, providing a basis for further study and classification. The ecological significance of Sphingomonas crocodyli lies in its potential role in biogeochemical cycles and its interactions within microbial communities. Given its rod shape and motility, Sphingomonas crocodyli may be well-suited for colonizing diverse substrates, including aquatic environments. This adaptability could enable it to participate in the degradation of organic pollutants or other complex compounds, contributing to nutrient cycling and ecosystem health. Further research into Sphingomonas crocodyli could reveal more about its ecological roles, metabolic capabilities, and potential applications in bioremediation or biotechnology. Understanding the characteristics of this bacterium enhances our knowledge of microbial diversity and the functions of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas crocodyli
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas crocodyli
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas crocodyli strain CCP-7 NODE_8_length_5669_cov_137,

Gene Summary

Adenine Count

864104 bp

Thymine Count

867777 bp

Guanine Count

1579726 bp

Cytosine Count

1572024 bp

Genome Length

4884161 bp

Protein-coding Genes

4559 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pep-cterm-box response regulator transcription factorEOD43_20585Not AvailableNegative4294258 - 429561649047.0
pep-cterm system histidine kinase prskEOD43_20590Not AvailableNegative4295616 - 429764673025.2
tigr03013 family pep-cterm/xrta system glycosyltransferaseEOD43_20595Not AvailableNegative4297651 - 429903951423.6
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseEOD43_20600Not AvailablePositive4299135 - 430023538645.2
helix-turn-helix domain-containing proteinEOD43_20605Not AvailableNegative4300371 - 430176250702.8
response regulatorEOD43_20610Not AvailablePositive4301990 - 430252018258.6
glycine cleavage system aminomethyltransferase gcvtEOD43_20615Not AvailablePositive4302865 - 430398040038.0
glycine cleavage system protein gcvhEOD43_20620Not AvailablePositive4303984 - 430435512936.9
aminomethyl-transferring glycine dehydrogenase subunit gcvpaEOD43_20625Not AvailablePositive4304517 - 430587547857.8
glycine dehydrogenase subunit 2EOD43_20630Not AvailablePositive4305872 - 430744955729.7

Displaying genes 4071 – 4080 of 4632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.