Sphingomonas crocodyli

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas crocodyli is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Sphingomonas crocodyli can be referenced under the accession number SACN00000000.1, providing a basis for further study and classification. The ecological significance of Sphingomonas crocodyli lies in its potential role in biogeochemical cycles and its interactions within microbial communities. Given its rod shape and motility, Sphingomonas crocodyli may be well-suited for colonizing diverse substrates, including aquatic environments. This adaptability could enable it to participate in the degradation of organic pollutants or other complex compounds, contributing to nutrient cycling and ecosystem health. Further research into Sphingomonas crocodyli could reveal more about its ecological roles, metabolic capabilities, and potential applications in bioremediation or biotechnology. Understanding the characteristics of this bacterium enhances our knowledge of microbial diversity and the functions of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas crocodyli
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas crocodyli
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas crocodyli strain CCP-7 NODE_8_length_5669_cov_137,

Gene Summary

Adenine Count

864104 bp

Thymine Count

867777 bp

Guanine Count

1579726 bp

Cytosine Count

1572024 bp

Genome Length

4884161 bp

Protein-coding Genes

4559 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase small subunitEOD43_15800Not AvailableNegative3302063 - 330266821590.7
3-isopropylmalate dehydratase large subunitEOD43_15805Not AvailableNegative3302665 - 330408049531.0
coa transferaseEOD43_15810Not AvailableNegative3304077 - 330525842094.8
duf485 domain-containing proteinEOD43_15815Not AvailablePositive3305403 - 330573211606.2
cation acetate symporterEOD43_15820Not AvailablePositive3305729 - 330742659474.7
pqq-dependent dehydrogenase, methanol/ethanol familyEOD43_15825Not AvailablePositive3307668 - 330978576542.2
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseEOD43_15830Not AvailableNegative3309786 - 331029217718.4
cobalamin biosynthesis protein cobdEOD43_15835Not AvailableNegative3310289 - 331121232420.6
pyridoxal phosphate-dependent class ii aminotransferaseEOD43_15840Not AvailableNegative3311205 - 331217635184.0
adenosylcobinamide-gdp ribazoletransferaseEOD43_15845Not AvailableNegative3312173 - 331289225058.4

Displaying genes 3141 – 3150 of 4632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.