Sphingomonas crocodyli

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas crocodyli is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Sphingomonas crocodyli can be referenced under the accession number SACN00000000.1, providing a basis for further study and classification. The ecological significance of Sphingomonas crocodyli lies in its potential role in biogeochemical cycles and its interactions within microbial communities. Given its rod shape and motility, Sphingomonas crocodyli may be well-suited for colonizing diverse substrates, including aquatic environments. This adaptability could enable it to participate in the degradation of organic pollutants or other complex compounds, contributing to nutrient cycling and ecosystem health. Further research into Sphingomonas crocodyli could reveal more about its ecological roles, metabolic capabilities, and potential applications in bioremediation or biotechnology. Understanding the characteristics of this bacterium enhances our knowledge of microbial diversity and the functions of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas crocodyli
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas crocodyli
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas crocodyli strain CCP-7 NODE_8_length_5669_cov_137,

Gene Summary

Adenine Count

864104 bp

Thymine Count

867777 bp

Guanine Count

1579726 bp

Cytosine Count

1572024 bp

Genome Length

4884161 bp

Protein-coding Genes

4559 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidate cytidylyltransferaseEOD43_08040Not AvailablePositive1679712 - 168050927690.9
1-deoxy-d-xylulose-5-phosphate reductoisomeraseEOD43_08045Not AvailablePositive1680499 - 168165940084.1
rip metalloproteaseEOD43_08050Not AvailablePositive1681656 - 168278941548.1
outer membrane protein assembly factor bamaEOD43_08055Not AvailablePositive1682907 - 168554697971.1
omph family outer membrane proteinEOD43_08060Not AvailablePositive1685546 - 168616921465.7
3-hydroxyacyl-acp dehydratase fabzEOD43_08065Not AvailablePositive1686176 - 168666417260.3
metallophosphoesteraseEOD43_08070Not AvailableNegative1686688 - 168741626927.3
holliday junction resolvase ruvxEOD43_08075Not AvailableNegative1687452 - 168790716100.5
duf3089 domain-containing proteinEOD43_08080Not AvailableNegative1687904 - 168901940165.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcEOD43_08085Not AvailablePositive1689225 - 168951210136.2

Displaying genes 1601 – 1610 of 4632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.