Nitrospira sp. ST-bin5

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira sp. ST-bin5 is a bacterium characterized by having a single replicon, which indicates its genetic organization is relatively straightforward, potentially contributing to its adaptability in various environments. The genomic data for this organism is available under the accession MSXN00000000.1, providing a resource for further analysis and research. Nitrospira species are known for their role in the nitrogen cycle, particularly in the oxidation of nitrite to nitrate. This process is essential for maintaining nitrogen balance in ecosystems, particularly in aquatic environments where nitrogen compounds can significantly impact water quality and ecosystem health. The ecological significance of Nitrospira sp. ST-bin5 lies in its potential contributions to biogeochemical cycles, particularly in environments where nitrification processes are crucial for nutrient cycling. Given its classification within the Nitrospira genus, it can be inferred that Nitrospira sp. ST-bin5 likely plays a role in nitrification, although specific functional traits and metabolic pathways would require further investigation based on the genomic data available. Understanding the role and mechanisms of Nitrospira sp. ST-bin5 can provide insights into nitrogen cycling and the overall health of microbial communities in various habitats. This highlights the importance of studying such microorganisms to enhance our understanding of ecological interactions and nutrient dynamics in the environment.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira sp. ST-bin5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira sp. ST-bin5 4008, whole genome shotgun sequence.

Gene Summary

Adenine Count

841127 bp

Thymine Count

841472 bp

Guanine Count

1165098 bp

Cytosine Count

1160112 bp

Genome Length

4009378 bp

Protein-coding Genes

3845 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna mismatch repair protein muttBVN29_14240Not AvailablePositive2870455 - 287085915521.7
hypothetical proteinBVN29_14245Not AvailablePositive2870856 - 287157227029.2
hypothetical proteinBVN29_14250Not AvailableNegative2871595 - 287257834800.7
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabBVN29_14255Not AvailableNegative2873222 - 287455649645.3
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabBVN29_14260Not AvailableNegative2874553 - 287590249157.4
hypothetical proteinBVN29_14265Not AvailablePositive2876020 - 287642715763.5
muropeptide transporter ampgBVN29_14270Not AvailablePositive2876599 - 287789145339.9
hypothetical proteinBVN29_14275Not AvailableNegative2877888 - 287818111207.4
hypothetical proteinBVN29_14280Not AvailablePositive2878320 - 287869113716.9
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependentBVN29_14285Not AvailablePositive2878981 - 2882514130901.0

Displaying genes 2791 – 2800 of 3892 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.