Lysinibacillus endophyticus str. DSM 100506

RodMotile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Ureibacillus

Description

Lysinibacillus endophyticus strain DSM 100506 is a soil-dwelling, mesophilic bacterium characterized by its rod-shaped morphology and the ability to form chains. This organism is classified as a chemoheterotroph, indicating that it derives energy from organic compounds, which is typical for many soil bacteria that contribute to nutrient cycling in their ecosystems. One notable feature of L. endophyticus is its mobility, facilitated by the presence of flagella. This motility may play a role in its ability to navigate through the soil environment, allowing it to access nutrients and interact with other microorganisms. Additionally, it is capable of sporulation, a survival mechanism that enables the bacterium to endure unfavorable environmental conditions. The genomic data for L. endophyticus is accessible under the accession number RBZN00000000.1, which provides a resource for further study of its genetic characteristics and potential applications. With a single replicon, the structure of its genome may enable efficient replication and adaptation to its habitat. Ecologically, Lysinibacillus endophyticus likely contributes to soil health by participating in the decomposition of organic matter and potentially supporting plant growth through its endophytic associations. The ability to form spores suggests that it can persist in varying soil conditions, thereby playing a crucial role in maintaining microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusUreibacillus
SpeciesUreibacillus endophyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lysinibacillus endophyticus strain DSM 100506

Gene Summary

Adenine Count

1149229 bp

Thymine Count

1149828 bp

Guanine Count

613854 bp

Cytosine Count

621825 bp

Genome Length

3534833 bp

Protein-coding Genes

3375 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD8M03_03295Not AvailableNegative686249 - 6864467732.05
mfs transporterD8M03_03300Not AvailablePositive686823 - 68799843151.4
carboxynorspermidine decarboxylaseD8M03_03305Not AvailableNegative688086 - 68922543291.6
saccharopine dehydrogenase family proteinD8M03_03310Not AvailableNegative689226 - 69044946058.9
hypothetical proteinD8M03_03315Not AvailablePositive690746 - 69175338679.7
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdD8M03_03320Not AvailableNegative691771 - 69316252420.8
riboflavin synthaseD8M03_03325Not AvailablePositive693910 - 69454823214.0
3,4-dihydroxy-2-butanone-4-phosphate synthaseD8M03_03330Not AvailablePositive694568 - 69519123029.7
6,7-dimethyl-8-ribityllumazine synthaseD8M03_03335Not AvailablePositive695195 - 69566216712.2
delta-lactam-biosynthetic de-n-acetylaseD8M03_03340Not AvailableNegative695805 - 69659629894.5

Displaying genes 661 – 670 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.