Lysinibacillus endophyticus str. DSM 100506

RodMotile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Ureibacillus

Description

Lysinibacillus endophyticus strain DSM 100506 is a soil-dwelling, mesophilic bacterium characterized by its rod-shaped morphology and the ability to form chains. This organism is classified as a chemoheterotroph, indicating that it derives energy from organic compounds, which is typical for many soil bacteria that contribute to nutrient cycling in their ecosystems. One notable feature of L. endophyticus is its mobility, facilitated by the presence of flagella. This motility may play a role in its ability to navigate through the soil environment, allowing it to access nutrients and interact with other microorganisms. Additionally, it is capable of sporulation, a survival mechanism that enables the bacterium to endure unfavorable environmental conditions. The genomic data for L. endophyticus is accessible under the accession number RBZN00000000.1, which provides a resource for further study of its genetic characteristics and potential applications. With a single replicon, the structure of its genome may enable efficient replication and adaptation to its habitat. Ecologically, Lysinibacillus endophyticus likely contributes to soil health by participating in the decomposition of organic matter and potentially supporting plant growth through its endophytic associations. The ability to form spores suggests that it can persist in varying soil conditions, thereby playing a crucial role in maintaining microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusUreibacillus
SpeciesUreibacillus endophyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lysinibacillus endophyticus strain DSM 100506

Gene Summary

Adenine Count

1149229 bp

Thymine Count

1149828 bp

Guanine Count

613854 bp

Cytosine Count

621825 bp

Genome Length

3534833 bp

Protein-coding Genes

3375 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2975 domain-containing proteinD8M03_15165Not AvailableNegative3099249 - 309973117948.8
sec-c domain-containing proteinD8M03_15170Not AvailablePositive3100036 - 310102238447.9
zinc-finger domain-containing proteinD8M03_15175Not AvailableNegative3101078 - 31012697325.89
reverse transcriptase-like proteinD8M03_15180Not AvailablePositive3101429 - 310182414367.3
type ii pantothenate kinaseD8M03_15185Not AvailableNegative3102333 - 310316330309.3
dna polymerase iii subunit epsilonD8M03_15190Not AvailableNegative3103256 - 310434442535.5
phytoene/squalene synthase family proteinD8M03_15195Not AvailablePositive3104568 - 310539531585.1
d-serine ammonia-lyaseD8M03_15200Not AvailableNegative3105464 - 310645636300.7
had family hydrolaseD8M03_15210Not AvailablePositive3106917 - 310753724119.3
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeD8M03_15215Not AvailablePositive3107646 - 310907353321.8

Displaying genes 3001 – 3010 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.