Lysinibacillus endophyticus str. DSM 100506

RodMotile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Ureibacillus

Description

Lysinibacillus endophyticus strain DSM 100506 is a soil-dwelling, mesophilic bacterium characterized by its rod-shaped morphology and the ability to form chains. This organism is classified as a chemoheterotroph, indicating that it derives energy from organic compounds, which is typical for many soil bacteria that contribute to nutrient cycling in their ecosystems. One notable feature of L. endophyticus is its mobility, facilitated by the presence of flagella. This motility may play a role in its ability to navigate through the soil environment, allowing it to access nutrients and interact with other microorganisms. Additionally, it is capable of sporulation, a survival mechanism that enables the bacterium to endure unfavorable environmental conditions. The genomic data for L. endophyticus is accessible under the accession number RBZN00000000.1, which provides a resource for further study of its genetic characteristics and potential applications. With a single replicon, the structure of its genome may enable efficient replication and adaptation to its habitat. Ecologically, Lysinibacillus endophyticus likely contributes to soil health by participating in the decomposition of organic matter and potentially supporting plant growth through its endophytic associations. The ability to form spores suggests that it can persist in varying soil conditions, thereby playing a crucial role in maintaining microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusUreibacillus
SpeciesUreibacillus endophyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lysinibacillus endophyticus strain DSM 100506

Gene Summary

Adenine Count

1149229 bp

Thymine Count

1149828 bp

Guanine Count

613854 bp

Cytosine Count

621825 bp

Genome Length

3534833 bp

Protein-coding Genes

3375 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosamine 6-phosphate synthetaseD8M03_10775Not AvailablePositive2210391 - 221079215354.1
dmt family transporterD8M03_10780Not AvailablePositive2210910 - 221179132441.9
hypothetical proteinD8M03_10785Not AvailableNegative2211817 - 221224817618.3
virulence factorD8M03_10790Not AvailableNegative2212328 - 221346142736.5
abc transporter atp-binding proteinD8M03_10795Not AvailableNegative2213474 - 221536071588.3
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelataseD8M03_10800Not AvailableNegative2216064 - 221670224343.1
hd domain-containing proteinD8M03_10805Not AvailableNegative2216881 - 221750123408.7
doxx family proteinD8M03_10810Not AvailablePositive2217635 - 221806315657.7
ribose abc transporter substrate-binding protein rbsbD8M03_10815Not AvailableNegative2218168 - 221908231577.5
ribose abc transporter permeaseD8M03_10820Not AvailableNegative2219094 - 222003232803.3

Displaying genes 2141 – 2150 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.