Lysinibacillus endophyticus str. DSM 100506

RodMotile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Ureibacillus

Description

Lysinibacillus endophyticus strain DSM 100506 is a soil-dwelling, mesophilic bacterium characterized by its rod-shaped morphology and the ability to form chains. This organism is classified as a chemoheterotroph, indicating that it derives energy from organic compounds, which is typical for many soil bacteria that contribute to nutrient cycling in their ecosystems. One notable feature of L. endophyticus is its mobility, facilitated by the presence of flagella. This motility may play a role in its ability to navigate through the soil environment, allowing it to access nutrients and interact with other microorganisms. Additionally, it is capable of sporulation, a survival mechanism that enables the bacterium to endure unfavorable environmental conditions. The genomic data for L. endophyticus is accessible under the accession number RBZN00000000.1, which provides a resource for further study of its genetic characteristics and potential applications. With a single replicon, the structure of its genome may enable efficient replication and adaptation to its habitat. Ecologically, Lysinibacillus endophyticus likely contributes to soil health by participating in the decomposition of organic matter and potentially supporting plant growth through its endophytic associations. The ability to form spores suggests that it can persist in varying soil conditions, thereby playing a crucial role in maintaining microbial diversity and function in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusUreibacillus
SpeciesUreibacillus endophyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Lysinibacillus endophyticus strain DSM 100506

Gene Summary

Adenine Count

1149229 bp

Thymine Count

1149828 bp

Guanine Count

613854 bp

Cytosine Count

621825 bp

Genome Length

3534833 bp

Protein-coding Genes

3375 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
para family proteinD8M03_09815Not AvailableNegative2010548 - 201130927804.9
nucleoid occlusion proteinD8M03_09820Not AvailableNegative2011471 - 201234633650.8
16s rrna (guanine(527)-n(7))-methyltransferase rsmgD8M03_09825Not AvailableNegative2012644 - 201336027071.7
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgD8M03_09830Not AvailableNegative2013430 - 201532570187.6
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeD8M03_09835Not AvailableNegative2015447 - 201683251268.7
protein jagD8M03_09840Not AvailableNegative2017103 - 201787928925.8
membrane protein insertase yidcD8M03_09845Not AvailableNegative2017876 - 201864628482.2
ribonuclease p protein componentD8M03_09850Not AvailableNegative2018792 - 201913613493.8
50s ribosomal protein l34D8M03_09855Not AvailableNegative2019215 - 20193495206.6
chromosomal replication initiator protein dnaaD8M03_09860Not AvailablePositive2019944 - 202129050741.6

Displaying genes 1951 – 1960 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.